Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0874 ATGGGATCTCAAGGGGAAGCGACAACCCAAGAGCCAAATACACAATATTTGGCCTACCAAGGATCCTCCTTTTACAATCTAACTCTTGATGAAGTACAGAACCAGCTTGGAAATTTAGGTAAGCAACTGGGAAGCATGAATCTTGATGAACTGCTGAAGAGTGTGGGAACTGCAGAAACTAGTGGTCAACTAGCTCCTGGGTCGTCCTCTCTGAATCGACAGAACAGCATGACATTATTATCTGGGGATGTTAGAAAGAAAACTGTTGATGAAGTTTGGAGAGATATACAGCAACACAAGAAGATCAGCAATAAAAATAAGCAAGAGGGGAAATCTCAGGAAAGACAGCCAACACTAGGAGAGATGACTCTGGAGGATTTTCTAGCGAAGGCAGGAGTGATTTTTGATTCAAATGTTGCTTCTGAACAACACACTATTTCATCACAACAAGATCATTGGATTCAATACCATCTCTCTTCTTCTCTGCAACAGCATCATCAAAATCATCATCATCATCATGATGTGATGGCAGGTTTAATGGCTGGCCATGGTGTTCAACAACAGCCTAATTTGCCACTAGCAGTAGTGAACCCGAACCAGGTTTTGGATTCATCCTACTCTGAAAATATGGTGGCAACAATTTCACCATCGTCTTTGATGGGTAAGTTATCAGATACACATAGTCCAGGAAGGAAAAGGGAGGCTTCTGGAGGTGATGTGGTTGAGAAAACCATGGAGAGAAGGAAGAAAAGGATGATAAAAAATAGAGAATCTGCAGCTAGGTCACGAGCAAGAAAGCAGGCTTACACGCAGGAGCTGGAGATTAAAATATCACGTTTGGAAGAGGAGAATGAAAGGCTTAGAAGACAGTATGAAATAGAGAAAGTGTTGCCATATGTACCACCAACTGAGGCTAAGCATCAGCTTCGCAGAACAAGTTCGGCTTCTTTTTGA 954 0.4214 MGSQGEATTQEPNTQYLAYQGSSFYNLTLDEVQNQLGNLGKQLGSMNLDELLKSVGTAETSGQLAPGSSSLNRQNSMTLLSGDVRKKTVDEVWRDIQQHKKISNKNKQEGKSQERQPTLGEMTLEDFLAKAGVIFDSNVASEQHTISSQQDHWIQYHLSSSLQQHHQNHHHHHDVMAGLMAGHGVQQQPNLPLAVVNPNQVLDSSYSENMVATISPSSLMGKLSDTHSPGRKREASGGDVVEKTMERRKKRMIKNRESAARSRARKQAYTQELEIKISRLEEENERLRRQYEIEKVLPYVPPTEAKHQLRRTSSASF 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0874 317 CDD bZIP_plant_BZIP46 247 292 - -
Mibi02g0874 317 Pfam bZIP transcription factor 247 290 IPR004827 GO:0003700|GO:0006355
Mibi02g0874 317 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 19 316 IPR043452 GO:0003700|GO:0045893
Mibi02g0874 317 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 245 297 - -
Mibi02g0874 317 MobiDBLite consensus disorder prediction 226 242 - -
Mibi02g0874 317 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 250 265 IPR004827 GO:0003700|GO:0006355
Mibi02g0874 317 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 245 292 IPR004827 GO:0003700|GO:0006355
Mibi02g0874 317 Gene3D - 245 297 - -
Mibi02g0874 317 SMART brlzneu 243 315 IPR004827 GO:0003700|GO:0006355
Mibi02g0874 317 MobiDBLite consensus disorder prediction 219 242 - -
Mibi02g0874 317 Coils Coil 263 297 - -
Mibi02g0874 317 SUPERFAMILY Leucine zipper domain 247 293 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0874 Mibi-ChrMibi02 8477253 8479090 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0874 22 317 bZIP Transcription Factor Family AT3G56850 52.025 1.27e-88 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mibi02g0874 bZIP_1 2.9e-11 CL0018