Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0849 ATGGGAAGGCCTCCTTGCTGTGAGAAAGTTGGCATCAAGAAAGGTCCATGGACACCTGAGGAAGACATCATTCTTGTTTCTTACATCCAAGAACATGGTCCAGGAAATTGGAGATCAGTTCCTACTAATACTGGGTTGTCGAGGTGCAGCAAAAGTTGCAGGCTGAGATGGACGAACTACCTAAGGCCAGGAATCAAGAGGGGGAACTTCACTCCCCATGAGGAAGGAATGATAATTCATTTGCAAGCTCTACTGGGTAACAAATGGGCAGCCATAGCTTCGTACCTTCCTCAAAGGACAGATAACGATATAAAGAACTATTGGAACACCCATCTGAAGAAGAAGCTGAAAAAATTGCAACCAGGATTGGACCCGCACCTGGCATCATCAGCAAACTCCACAACAACAACTATTAATAGCAGTCACTCTGTTACAAAAAGCTTTAATGAAGAGAGCAAGAGTAGTTCAGGTATGACAATGGGCAACAGCAACAACAACAACAACCACGGTGGCTCGTCTCAAAGGTCAGTCAGTCAATTTCAATCATCCACTGCCTACGCATCCAGTACTGAGAATATCTCTCGCCTCTTAGAAGGTTGGATGAGATCATCTCCAAAGACAGACAACACAAGTAATAATCTTCTCAAACCAACCGAAGATCACAAAGTAGAGCTTCAGAGTAATAACATGGTGATGAAGTCTGGTTTAAGTCTGATGTCCAACAACCAAACCAAAGATGAGAGAGAAGAGGGTGGTGGTGGTGGTGATATGATTGCCCATGAAGAGTTTGATTCCATTTTGTCTTATGAGAACCTTAATAATGCTGTTTGGGACAAGTCTACAGGTGATTCTATGCCTCCATCAACTCAGAAGATTACTTCTGAAGTTGCTGCTATTGTTGTTGATGATGATGATGACAAGGTTCGTGTTAAGCAAAGATCTGAGAATTCTACTTCTGATCCTCCATTGTCGGTTCTTGAGAAGTGGCTCTTAGATGAAAATGTTGGTCAAGTAGAGGAGATGATGGAGTTATCCCTTACTTTCTAA 1047 0.4269 MGRPPCCEKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLSRCSKSCRLRWTNYLRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKLQPGLDPHLASSANSTTTTINSSHSVTKSFNEESKSSSGMTMGNSNNNNNHGGSSQRSVSQFQSSTAYASSTENISRLLEGWMRSSPKTDNTSNNLLKPTEDHKVELQSNNMVMKSGLSLMSNNQTKDEREEGGGGGDMIAHEEFDSILSYENLNNAVWDKSTGDSMPPSTQKITSEVAAIVVDDDDDKVRVKQRSENSTSDPPLSVLEKWLLDENVGQVEEMMELSLTF 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0849 348 MobiDBLite consensus disorder prediction 126 185 - -
Mibi02g0849 348 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mibi02g0849 348 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mibi02g0849 348 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Mibi02g0849 348 MobiDBLite consensus disorder prediction 123 185 - -
Mibi02g0849 348 FunFam Transcription factor MYB60 68 140 - -
Mibi02g0849 348 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Mibi02g0849 348 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 236 - -
Mibi02g0849 348 FunFam MYB-related transcription factor 13 66 - -
Mibi02g0849 348 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mibi02g0849 348 MobiDBLite consensus disorder prediction 200 214 - -
Mibi02g0849 348 CDD SANT 69 111 IPR001005 -
Mibi02g0849 348 Gene3D - 13 66 - -
Mibi02g0849 348 SMART sant 66 114 IPR001005 -
Mibi02g0849 348 SMART sant 13 63 IPR001005 -
Mibi02g0849 348 MobiDBLite consensus disorder prediction 200 220 - -
Mibi02g0849 348 CDD SANT 16 61 IPR001005 -
Mibi02g0849 348 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mibi02g0849 348 Gene3D - 68 142 - -
Mibi02g0849 348 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0849 Mibi-ChrMibi02 8212027 8213473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0849 1 119 MYB Transcription Factor Family AT5G62470 90.756 2.69e-82 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi02g0849 Myb_DNA-binding 1.8e-15 CL0123