Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0817 ATGTTGTTAGACTTGGAACCCGTTTCGAAATATTGCAAGTCCAATGAAGAAGAAGAGGTAGGCGACGAAAGACCTCTACTTCTTCAATGCGCAGAACTCATCCTCCCATGGTTAACCCCTTTGGAGCTTGCCAGTGTCTCTTTGACCTGCAAAGCCCTTTCCCTAATTTCCAAGACCGTCATCCTCCGCCGCATATCTGATTCTTCCAGAGGATTCGAGAATTTGCCTATCCCATTTCACAACACCGTTGATGATACGCCGTACGCTTTCTTCACTTACACTCCTTCCCTAATTCTACCTTCTGACTCACATTTTCTTCGCCAATCTTGGGGTTCGAATTTTCCTCCCACTCGTGACTGGGTTGGTAAGCTTGCTATGGAATCGGTTAGTTTAGTTGATGAAGAGGGTCAGAGTGTATCGGGATGTGACTGTGTCACTTGTGGGGAGGTGGGGGATGAAGATGACACGTGTCCTTGTTCGAGCTTGGCTGGGTTGGATGTGGCTAACGAGTGCGGACCGAGTTGTAAATGTGGGTTGCAGTGTGGGAATCGGTTGAGTCAGAATGGGATTTCAGTTCGGTTGAAAATCGTGAGGGATAGGAGGAAAGGATGGGGTTTGTACGCTGACCAATTGATACAGAAGGGGCAGTTCGTATGTGAATATGCAGGTGAGCTCTTGACAACCAAGGAAGCGAGGAGGAGACATCTGTGTTATGATGAGCTTTCATCACAAGGCAAGTTTTCTTCTGCTCTTTTGGTTGTGAAGGAGCATCTGCCATCTGGAAGAGCTTGTCTGAGGATAAACATCGATTCCTCAAGAATAGGAAATGTTGCACGGTTCATTAATCATTCTTGTGATGGTGGTAATTTAACCACGAAACTAGTGAGAAGGTCAGGAGCTTTATTTCCTCAACTTTGTTTCTTTGCTTTAGAAGATATAGAAAAAGATGAAGAGCTTACTTTTAGCTATGGAGAAATCAGGACAAGGCCTATGGGCTTGCCATGTTTTTGTGGTAGCTCTTCTTGCTTTGGAACATTGCCCTCAGAAGTCACTTAA 1056 0.4536 MLLDLEPVSKYCKSNEEEEVGDERPLLLQCAELILPWLTPLELASVSLTCKALSLISKTVILRRISDSSRGFENLPIPFHNTVDDTPYAFFTYTPSLILPSDSHFLRQSWGSNFPPTRDWVGKLAMESVSLVDEEGQSVSGCDCVTCGEVGDEDDTCPCSSLAGLDVANECGPSCKCGLQCGNRLSQNGISVRLKIVRDRRKGWGLYADQLIQKGQFVCEYAGELLTTKEARRRHLCYDELSSQGKFSSALLVVKEHLPSGRACLRINIDSSRIGNVARFINHSCDGGNLTTKLVRRSGALFPQLCFFALEDIEKDEELTFSYGEIRTRPMGLPCFCGSSSCFGTLPSEVT 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0817 351 Pfam SET domain 203 324 IPR001214 GO:0005515
Mibi02g0817 351 Pfam Pre-SET motif 69 184 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mibi02g0817 351 SMART set_7 192 330 IPR001214 GO:0005515
Mibi02g0817 351 ProSiteProfiles SET domain profile. 192 324 IPR001214 GO:0005515
Mibi02g0817 351 SUPERFAMILY SET domain 74 344 IPR046341 -
Mibi02g0817 351 ProSiteProfiles Post-SET domain profile. 331 347 IPR003616 -
Mibi02g0817 351 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 63 340 - -
Mibi02g0817 351 Gene3D SET domain 50 329 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0817 Mibi-ChrMibi02 7883134 7884636 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0817 65 346 Su(var)3-9 homologs AT1G73100 28.481 2.99e-24 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mibi02g0817 SET 5.7e-19 No_clan