Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0794 ATGGAAATTCAATTCCAGCAGCCAAAGCAGGAACATCAGGAAGCAGGCATTCCAATAAGCAAAGTGGGGAAATTCAAAGGAAGAAAGAGAAGCCGAGGCAACAACCCAAACAAGTTTGTAGGGGTGAGGCAGAGACCTTCAGGGAGATGGGTGGCTGAGATCAAAGACACAACACAGAAGATAAGAATGTGGCTTGGCACTTTTGAGACTGCAGAGGAAGCTGCCAGAGCTTATGATGAAGCTGCTTACCTTCTTCGAGGCGCCAACACTCGCACCAACTTCATCACTCATGTCTCCATGGATTCTCCTCTCGCCTCTCGGATTCGAAATCTCCTCAACAATAAAAAAGCTGCAACCAAACAACAACAAAAACAACAGCAACAACAACAAGATCATGTGGTAGCAGCCTCTGTCCCAAAAGCCAGAAGCATGAATACTAGCACTACTAGTAGTTTTAGTGCTAGTATTAGCAGTAGTTCTAGCAGTACTATTGACAGCAATGAAAGTTCATTATCCAGTGGGACTGTTTTAGATGCCTCTATGTTTGATGATGCTTATAGACCAGATATGAGTAATTGCAAGGAGGAATTTGGCTTTGGTTCGATTTCCAATCTTTCATGGGGCGGTTTTGGACCAGTTTTTGATCGAATTCCTTTTGCTCAGGTTGCAGATGTTCCCAAGAATGATGTGGGTATGTCTAATGTTGGTGACTTGGATCTTTTGGAATTTGAAAGGATGAAAGTTGAGAGGCAAATATCAGCTTCACTGTATGCAATGAATGGAGTGCAAGAATACATGGAAACTGTGCAGGATCCCAATGAAGCTCTATGGGATCTTCCACCTTTGTGTTCACTGTTCTGTTAA 864 0.4317 MEIQFQQPKQEHQEAGIPISKVGKFKGRKRSRGNNPNKFVGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAAYLLRGANTRTNFITHVSMDSPLASRIRNLLNNKKAATKQQQKQQQQQQDHVVAASVPKARSMNTSTTSSFSASISSSSSSTIDSNESSLSSGTVLDASMFDDAYRPDMSNCKEEFGFGSISNLSWGGFGPVFDRIPFAQVADVPKNDVGMSNVGDLDLLEFERMKVERQISASLYAMNGVQEYMETVQDPNEALWDLPPLCSLFC 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0794 287 Coils Coil 108 129 - -
Mibi02g0794 287 CDD AP2 38 94 IPR001471 GO:0003700|GO:0006355
Mibi02g0794 287 SUPERFAMILY DNA-binding domain 38 95 IPR016177 GO:0003677
Mibi02g0794 287 MobiDBLite consensus disorder prediction 115 172 - -
Mibi02g0794 287 Gene3D AP2/ERF domain 37 96 IPR036955 GO:0003700|GO:0006355
Mibi02g0794 287 FunFam ethylene-responsive transcription factor RAP2-11 37 96 - -
Mibi02g0794 287 Pfam AP2 domain 38 87 IPR001471 GO:0003700|GO:0006355
Mibi02g0794 287 ProSiteProfiles AP2/ERF domain profile. 38 95 IPR001471 GO:0003700|GO:0006355
Mibi02g0794 287 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 13 252 - -
Mibi02g0794 287 PRINTS Ethylene responsive element binding protein signature 39 50 IPR001471 GO:0003700|GO:0006355
Mibi02g0794 287 PRINTS Ethylene responsive element binding protein signature 61 77 IPR001471 GO:0003700|GO:0006355
Mibi02g0794 287 SMART rav1_2 38 101 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0794 Mibi-ChrMibi02 7637367 7638230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0794 24 287 AP2-EREBP Transcription Factor Family AT5G19790 41.481 6.11e-52 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi02g0794 AP2 6.6e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g0794 02 7637367 7638230 Mibi02g0794 02 7637367 7638230 ECH