Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0780 ATGCCAGAGTTGAGAAGTGGAGCTAGAAGATCGAAACGACTTGGTGATCTTCAGCCTGCCCCACTGCCTGCCGATCAAGGAGAGAATTGTGCACAACCTGCTCCAACTAGAGCTAGGAGGAGAGTTGGAGGTGGAAGAGGACGCGGTAATGCCACAGCTGTAGCAAAAGGACCTTCACCAGCGGTACCCACAAGGCGAACTGCAGCCGGTCGAGGTCGGGGAGTGAGATTGATTAATCTTGACCCTGAACCTTGTGAAGTCCTTCCTGATCCAGTTGCACTTGGAGCCCCAGAACCCCTACGTGTTGAGGCAGTGGCCAACAATAAAGTTGTGATGGAAGGTGGAAGTGCGGACAAGGTGGTTGGAGCTGAAGAGGAAGCTACCACGACCCCTATTCCTGAGAGGGTTCAAGTTGGTACTTCTCCCATGTATAAGATTGAAAGGAAATTGGGTAAGGGTGGTTTCGGTCAAGTGTATGTTGGCAGAAGGGTGAATGGTGGCTCGGATCGGACAGGTCCTGATGCAATTGAGGTTGCACTGAAGTTTGAGCACAGAAATAGTAAAGGTTGTAATTATGGACCTCCTTATGAGTGGCAGGTCTACAATACTTTGAATGGGTGTTATGGCATTCCCTGGGTCCATTACAAGGGTCGACAAGGAGATTTTTATATTCTGGTCATGGACATGCTTGGACCCAGTCTTTGGGATGTATGGAATTCACTTGGCCAATCGATGTCGCCAAACATGGTTGCCTGCATAGCAGTGGAAGCAATATCAATTCTTGAGAAGCTTCACATGAAAGGGTTTGTGCATGGAGATGTAAAACCAGAAAACTTCTTACTTGGTCAACCTGGAACAGCTGATGAGAAGAAACTATATCTTATCGATCTTGGGTTGGCTTCAAGATGGAAGGATGCATCATCTGGTCAGCATGTTGATTATGACCAGAGACCTGATATTTTCAGGGGAACAATAAGGTATGCTAGCGTGCATGCACATTTAGGTAGGACAGGAAGTCGAAGGGACGATCTTGAGTCACTGGCCTACACACTTATATTTCTCATAAAAGGGAGGTTACCATGGCAGGGTTATCAGGGTGACAATAAAAGTTTTCTTGTCTGTAAGAAGAAGATGTCCACTTCTCCAGAGTTAATGTGTTGCTTTTGTCCTGCCCCATTCAAACAATTCCTTGAAGCTGTTACTAACATGAGATTTGATGAGGAGCCTAATTATTCCAAGCTTATATCTTTTTTTGATAGCTTGATTGAACCATGTGTACCATTGAGACCAATCAGAATTGATGGAGCTTTGAAGGTTGGACAAAAGCGTGGGAGGATGCTTATTAACCTGGAAGATGATGAGCAGCCAAAGAAGAAAGTACGCATGGGGAGTCCTGCTACTCAGTGGATTTCAGTTTATAATGCACGTCGTCCCATGAAGCAGAGGTATCATTACAATGTTGCAGACACAAGGCTTCGTCAGCATGTAGACAAGGGTAATGAGGATGGGTTGTACATCAGCTCTGTGGCCTCCTCATCAAATCTATGGGCCCTAATCATGGATGCAGGGACAGGTTTTTCTTCCCAGGTGTATGAATTGTCAGCCGTCTTCCTCCATAAGGACTGGATTATGGAACAGTGGGAGAAAAATTATTATATCAGTTCAATAGCTGGTGCAAATAATGGGAGTTCCTTGGTTGTCATGTCCAAAGGAACACCTTACACGCAGCAATCCTACAAAGTGAGTGAATCATTTCCTTTCAAGTGGATTAATAAGAAGTGGAAAGAAGGGTTCCATGTTACCTCCATGACTACTGCTGGCAGTCGCTGGGGTGTTGTAATGTCCAGGAATGCTGGGTATTCCGATCAGGTTGTGGAGCTTGACTTTTTATATCCAAGTGAAGGAATACACCGGCGATGGGAAAGTGGCTTCCGCATAACATCCATGGCTGCTACTGCAGATCAGGCAGCTTTTATACTGAGCATACCAAAACGCAAATTGCTTGATGAAACTCAAGAGACTCTGCGCACCTCTGCCTTCCCTAGCACCCACGTAAAGGAAAAATGGTCCAAAAATCTCTACATTGCATCAATTTGTTACGGTCGGACTGTGTGCTAG 2118 0.4566 MPELRSGARRSKRLGDLQPAPLPADQGENCAQPAPTRARRRVGGGRGRGNATAVAKGPSPAVPTRRTAAGRGRGVRLINLDPEPCEVLPDPVALGAPEPLRVEAVANNKVVMEGGSADKVVGAEEEATTTPIPERVQVGTSPMYKIERKLGKGGFGQVYVGRRVNGGSDRTGPDAIEVALKFEHRNSKGCNYGPPYEWQVYNTLNGCYGIPWVHYKGRQGDFYILVMDMLGPSLWDVWNSLGQSMSPNMVACIAVEAISILEKLHMKGFVHGDVKPENFLLGQPGTADEKKLYLIDLGLASRWKDASSGQHVDYDQRPDIFRGTIRYASVHAHLGRTGSRRDDLESLAYTLIFLIKGRLPWQGYQGDNKSFLVCKKKMSTSPELMCCFCPAPFKQFLEAVTNMRFDEEPNYSKLISFFDSLIEPCVPLRPIRIDGALKVGQKRGRMLINLEDDEQPKKKVRMGSPATQWISVYNARRPMKQRYHYNVADTRLRQHVDKGNEDGLYISSVASSSNLWALIMDAGTGFSSQVYELSAVFLHKDWIMEQWEKNYYISSIAGANNGSSLVVMSKGTPYTQQSYKVSESFPFKWINKKWKEGFHVTSMTTAGSRWGVVMSRNAGYSDQVVELDFLYPSEGIHRRWESGFRITSMAATADQAAFILSIPKRKLLDETQETLRTSAFPSTHVKEKWSKNLYIASICYGRTVC 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0780 705 PANTHER CASEIN KINASE-RELATED 137 669 - -
Mibi02g0780 705 SUPERFAMILY Protein kinase-like (PK-like) 144 425 IPR011009 -
Mibi02g0780 705 Gene3D Transferase(Phosphotransferase) domain 1 113 459 - -
Mibi02g0780 705 FunFam Casein kinase 1-like protein 116 464 - -
Mibi02g0780 705 CDD STKc_CK1 143 418 - -
Mibi02g0780 705 Pfam Protein kinase domain 144 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g0780 705 SMART serkin_6 144 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g0780 705 ProSiteProfiles Protein kinase domain profile. 144 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g0780 705 MobiDBLite consensus disorder prediction 1 70 - -
Mibi02g0780 705 ProSitePatterns Protein kinases ATP-binding region signature. 150 181 IPR017441 GO:0005524
Mibi02g0780 705 ProSitePatterns Serine/Threonine protein kinases active-site signature. 269 281 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0780 Mibi-ChrMibi02 7541267 7546739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0780 261 418 MAP Kinase Kinase Kinase AT5G50180 23.750 3.34e-07 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Mibi02g0780 Pkinase 4.1e-16 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g0780 02 7541267 7546739 Mibi02g0780 02 7541267 7546739 ECH