Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0772 ATGGATGTGTGCCGGAATGTATCAGTTCCCGGTGAGTGCAAGCAAGAACAGGTTCTTTCCCCTTCTTGCTCGAAGCTTTCTTCCTTATCAACCAGCCTCGATGACCTCTTCTCTGCTCAGAACACGGAGGTGGATGTCGGATTGGAGTGGCTGTCAGTATTTGTGGAAGACTGCTTTTCGAGCCAAGCAAGCTGCCTCTTGGCACCTCCTGATGTTCATCAAGCTACAACCACAACCTCAAAACCTTCACAGCCACTGCAGAGACCTCACCAGAATGAGTCTTCTCTGCAAAAATTTGCAGTGCCCGGAAAAGCCAGAAGCAAAAGGAAGAGACTTTCAGCCCCTAGAGCCAAAGACCCTTTAAGCATCTGGTCACACCATTTGAACCCACAGAACGAAGCCATAAGCTCAGATCCTCCACTGCTCAAACAGGCTTACTGGTTAGCAGACAGTGAACTCATCGTCCCAGAGAAGAAGAAGAAGGCAAAGGAAGAAGAAGGGAAAGAGGAGGGAGATGAAGATGAAGATGAAGAAGGGATGATGGTGAGGAAGGAGTTGGAGAGTGAGGTCAGCAATGGGCAAAATCCAATGCCAAGAAGATGCAGTCACTGCTTGGCACAGAGGACCCCACAATGGAGGGCAGGGCCATTGGGTCCAAAAACACTCTGCAACGCATGTGGGGTGAGGTACAAGTCTGGTAGGTTGTTGCCAGAGTATAGGCCAGCCAAGAGTCCAACTTTTGTTAGCTACTTGCACTCCAATTCCCACAAGAAAGTCTTGGAGATGAGGATGTCTCTTGTTTCCTCCCCTCCTTCTATTCCAAGGGAGCACCAGTGA 837 0.4958 MDVCRNVSVPGECKQEQVLSPSCSKLSSLSTSLDDLFSAQNTEVDVGLEWLSVFVEDCFSSQASCLLAPPDVHQATTTTSKPSQPLQRPHQNESSLQKFAVPGKARSKRKRLSAPRAKDPLSIWSHHLNPQNEAISSDPPLLKQAYWLADSELIVPEKKKKAKEEEGKEEGDEDEDEEGMMVRKELESEVSNGQNPMPRRCSHCLAQRTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPAKSPTFVSYLHSNSHKKVLEMRMSLVSSPPSIPREHQ 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0772 278 MobiDBLite consensus disorder prediction 73 118 - -
Mibi02g0772 278 FunFam GATA transcription factor 191 272 - -
Mibi02g0772 278 ProSiteProfiles GATA-type zinc finger domain profile. 199 231 IPR000679 GO:0006355|GO:0043565
Mibi02g0772 278 SMART GATA_3 195 249 IPR000679 GO:0006355|GO:0043565
Mibi02g0772 278 Gene3D - 190 262 IPR013088 GO:0006355|GO:0008270
Mibi02g0772 278 MobiDBLite consensus disorder prediction 158 197 - -
Mibi02g0772 278 PANTHER GATA TRANSCRIPTION FACTOR 21 267 - -
Mibi02g0772 278 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 196 258 - -
Mibi02g0772 278 MobiDBLite consensus disorder prediction 73 98 - -
Mibi02g0772 278 CDD ZnF_GATA 200 247 IPR000679 GO:0006355|GO:0043565
Mibi02g0772 278 ProSitePatterns GATA-type zinc finger domain. 201 226 IPR000679 GO:0006355|GO:0043565
Mibi02g0772 278 Pfam GATA zinc finger 201 235 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0772 Mibi-ChrMibi02 7485624 7486824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0772 20 263 C2C2-Gata Transcription Factor Family AT4G32890 40.625 4.80e-43 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mibi02g0772 GATA 7.1e-15 CL0167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g0772 02 7485624 7486824 Mibi06g1682 06 37325054 37326170 CCT
Mibi02g0772 02 7485624 7486824 Mibi02g0772 02 7485624 7486824 ECH