Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi02g0734 | ATGTCCAATGAGGAGGAACGAGATCGAACTCAAAGAAAAAAGCTGCGAAGGCCGAGGATGAGTTTTCAAGATCTTCAGGGTGGGGCCAAGCGACCCGTTTCCCGAACTCAATCGCCGTCGCAAGCTGTGGCCGCCGGAATTTTCCAGATCAATACAGGCGTTGCCACTTTCCGACGGCTCGTTGATAGCATTGGAACCGTCAAAGACACCGTCAGTCACCGCCAGAAGCTTCACGACACGAGGCAGCGGATATTGCAGCTGGTGAAGGATACTTCTGCCAAGCTCAAGGCCTTGAGCGAATCCGATCTTGCTACCGATGCCGATTCTGGTAAGAAAATTGAAGATGCTAAGCTGGCTAGAGATTTCCAAACCACATTGCAAGAATTCCAGAAAGTGCAACAGCTTGCTTCTGAGCGCGAATCTACCTACCTTCCTGCTTCTTCTTCTTTACCTACAAGTTCTGCCTCTGTTGGGGAATCAACTGACATAGGTCAAGAAAGCCAACCTTTAATCAGGGAACAAAAGAGGCAGGAGATACTCTTATTAGATAGTGATATCGCATTCAATGAGGCCATGATTGAAGAAAGAGAACAGGGCATCAAGGAGGTGGAGGTGCAAATTGGACAAGTAAATGAAATATTCAAGGACTTAGCCGTGCTGGTTCATGAACAGGGGGTGGTTATTGATGATATTCAATCAAATATTGACGCTTCTGCGGGTGCAACAACCCAAGCTACTACACAGTTAGTCAGGGCTTCCAAAAATATGAAATCTAAATGTTCATGGTGTTGGTGGGTGCTTGCAATTTTTGTTATAGTGGTGGTCGTGGTGCTTATTGTTCTCATTATTTAG | 852 | 0.4624 | MSNEEERDRTQRKKLRRPRMSFQDLQGGAKRPVSRTQSPSQAVAAGIFQINTGVATFRRLVDSIGTVKDTVSHRQKLHDTRQRILQLVKDTSAKLKALSESDLATDADSGKKIEDAKLARDFQTTLQEFQKVQQLASERESTYLPASSSLPTSSASVGESTDIGQESQPLIREQKRQEILLLDSDIAFNEAMIEEREQGIKEVEVQIGQVNEIFKDLAVLVHEQGVVIDDIQSNIDASAGATTQATTQLVRASKNMKSKCSWCWWVLAIFVIVVVVVLIVLII | 283 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi02g0734 | 283 | MobiDBLite | consensus disorder prediction | 140 | 168 | - | - | |
| Mibi02g0734 | 283 | FunFam | Syntaxin-22 like | 183 | 283 | - | - | |
| Mibi02g0734 | 283 | PANTHER | SYNTAXIN | 41 | 273 | IPR045242 | - | |
| Mibi02g0734 | 283 | SMART | SynN_4 | 27 | 141 | IPR006011 | GO:0016020 | |
| Mibi02g0734 | 283 | SUPERFAMILY | t-snare proteins | 36 | 245 | IPR010989 | GO:0016020|GO:0016192 | |
| Mibi02g0734 | 283 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Mibi02g0734 | 283 | FunFam | Syntaxin-22 like | 34 | 147 | - | - | |
| Mibi02g0734 | 283 | CDD | SNARE_Qa | 193 | 251 | - | - | |
| Mibi02g0734 | 283 | Pfam | Syntaxin-like protein | 44 | 143 | IPR006011 | GO:0016020 | |
| Mibi02g0734 | 283 | Pfam | SNARE domain | 227 | 278 | IPR000727 | - | |
| Mibi02g0734 | 283 | Gene3D | - | 187 | 283 | - | - | |
| Mibi02g0734 | 283 | MobiDBLite | consensus disorder prediction | 1 | 38 | - | - | |
| Mibi02g0734 | 283 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 190 | 252 | IPR000727 | - | |
| Mibi02g0734 | 283 | Gene3D | - | 28 | 149 | - | - | |
| Mibi02g0734 | 283 | SMART | tSNARE_6 | 185 | 252 | IPR000727 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi02g0734 | Mibi-ChrMibi02 | 7080028 | 7083293 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi02g0734 | 20 | 270 | SNARE and Associated Proteins | AT5G46860 | 58.366 | 2.87e-93 | 275 |