Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0725 ATGTCAGGGTCTCTTGCAGCAATAGTAGGGGGAGCTGCAGGGGCCGTGGCATTGGTAGGGATAGTTATAGCACTCATATGCTTCTGCCTATCTCGCAGGAGGAATGTCTCAAGGACTTCAGAGACAGGATCTTCTGATCCTTCCCAAGTGGGAAGACAGGGTGGGATTGAGTTGACTTTGCGAGATACAAGGCGGTTTGAGCTGGAAGAACTATCTCAGGCTACAAAGAATTTCAGTGACAGAAATTTGATCGGAGAAGGGAAGTTTGGGGAGGTTTACAAAGGCTTACTTCATCATGATGGTATGCTTGTGGCCATCAAAAAGCGGCAGGGACTTCCGAGCCAGGAATTTGTTGATGAGGCTCGCTACCTCTCATCCATTAACCATCGGAATCTTGTAACTCTCTTGGGCTACTGCCAGGAACAAAATATGCAGTTTCTTATATACGAATATGTGCCCAATGGGAGCGTCTCTAGTCACTTGTATGGTACTGGTCAACAATCAAAAGAGAAGCTAGAATTCAAGAATAGACTTTCAATAGCTCTAGGTGCAGCTACAGGTTTGGCTCATATTCATTCCTTGAGCCCCCGTTTGGTGCATAAGGATTTCAAAACAGCCAATGTTCTTGTGGATGAAAATTTCATTGCTAAGGTAGCAGATGCTGGACTGCGTAATTTCCTGGGAAGAGTTGATATTGCAGGCTCATCTTCCCAAGTTGCAGCAGATGAAATATTCCTTGCTCCCGAGGTAAGAGAATTCAGACGATTTTCTGAAAAAAGTGATGTGTACAGTTTTGGGGTATTTTTGTTGGAACTATTAAGTGGGAAGGAAGCAACAGAATCTCCAACTTCAGACTCGAATCAGAATCTAGTTGAATGGGTGCAAGTTAATGAAGACCATCGCATAATGTCTAACATAATTGATCAGAGATTGGGGAGCAGTTTCACAGCAGAAGGCATGGAAGAGTTTATCTTGCTGGTAGCTCGATGTTTGAGTCCTTCAAGTGAGAGGAGACCGTCCATGAGTTATGTTGTAATGGAACTTGGACGGATTCTTGAAAAGGAAATGAACTTGACGACAATGATGGGCGAAGGCACCCCAACTGTGACCCTTGGAAGTCAGCTATTCAAAGCAACAAGGTAA 1143 0.4427 MSGSLAAIVGGAAGAVALVGIVIALICFCLSRRRNVSRTSETGSSDPSQVGRQGGIELTLRDTRRFELEELSQATKNFSDRNLIGEGKFGEVYKGLLHHDGMLVAIKKRQGLPSQEFVDEARYLSSINHRNLVTLLGYCQEQNMQFLIYEYVPNGSVSSHLYGTGQQSKEKLEFKNRLSIALGAATGLAHIHSLSPRLVHKDFKTANVLVDENFIAKVADAGLRNFLGRVDIAGSSSQVAADEIFLAPEVREFRRFSEKSDVYSFGVFLLELLSGKEATESPTSDSNQNLVEWVQVNEDHRIMSNIIDQRLGSSFTAEGMEEFILLVARCLSPSSERRPSMSYVVMELGRILEKEMNLTTMMGEGTPTVTLGSQLFKATR 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0725 380 FunFam Protein kinase superfamily protein 43 151 - -
Mibi02g0725 380 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 15 357 - -
Mibi02g0725 380 ProSiteProfiles Protein kinase domain profile. 78 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g0725 380 ProSitePatterns Protein kinases ATP-binding region signature. 84 108 IPR017441 GO:0005524
Mibi02g0725 380 FunFam Protein kinase superfamily protein 152 365 - -
Mibi02g0725 380 Gene3D Phosphorylase Kinase; domain 1 43 151 - -
Mibi02g0725 380 Gene3D Transferase(Phosphotransferase) domain 1 152 366 - -
Mibi02g0725 380 SUPERFAMILY Protein kinase-like (PK-like) 63 356 IPR011009 -
Mibi02g0725 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Mibi02g0725 380 Pfam Protein tyrosine and serine/threonine kinase 82 348 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0725 Mibi-ChrMibi02 6991480 6993937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0725 4 374 Receptor kinase-like Gene Family AT3G46290 36.869 5.97e-63 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Mibi02g0725 PK_Tyr_Ser-Thr 4.2e-43 CL0016