Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0718 ATGGACGCCTCTCACTTTAAACAAGTTGTGAAAGAGATAGAGCTGAACAAGGTGGATCGAAGGCATGGGAAGAGAGCTCTATCTTCTGATCTTGATGCATCAGAGGCCAATAAAAAAGAAGGTTTCAAGTCTCAGCTGGCTAACACATCACCATCTGATGAGACCCAAAAGGAAGAAAATTCATCGCCTTCCTCCACCTTTTCGTATCTTATCAGCACCAGTGATACTAACACCTTTTCTCTCCCAATCTCACAAGGTCAAGTAATAAGCAACTCTTCTGGGTTCATCCAGAAGCACGACCCATATCATCACCCTACACATCAAAATCAAGGCAACAACAATAATGCGAGAAAAAGGAACTATAGAGGAGTAAGGCAAAGACCGTGGGGGAAGTGGGCAGCCGAAATCAGAGACCCTAAAAAAGCAGCTAGAGTATGGCTTGGAACCTTCGAGACAGCCGAGGATGCAGCCGCTGCTTATGATGCTGCAGCTTTAAGGTTCAGAGGAAGCAAAGCCAAACTTAACTTCCCCGAACGTGTTTCTTCATCACAACCTCATCAGCTTCCGGCTGCTCCATCGCCTCCCACACCGCCGGAGGCCCCACTTACTGCGTCTCAGCCTCTAGCGCCGCCGCCGCCGGATGAAGGGTTCCCAAATCTAGCTCAGTATGCTCAGCTGCTTTGTGGTGGTGATGATGAGCTGAAAATAGCTGCTTCGGGACTTTATTATGATTCTTCTCCGTTATTCTCATCGTCATCATCGGGAGTGTCTTCTTCGTCTGCTTCTGTTTCTGAGTCTGATCAACATCAAGTTCAACATACGCGGATAACATACAAGGGAGATTCTGGTTCTTATTTTTTTGATGGAAGAAATACGATGGGATAG 885 0.4678 MDASHFKQVVKEIELNKVDRRHGKRALSSDLDASEANKKEGFKSQLANTSPSDETQKEENSSPSSTFSYLISTSDTNTFSLPISQGQVISNSSGFIQKHDPYHHPTHQNQGNNNNARKRNYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEDAAAAYDAAALRFRGSKAKLNFPERVSSSQPHQLPAAPSPPTPPEAPLTASQPLAPPPPDEGFPNLAQYAQLLCGGDDELKIAASGLYYDSSPLFSSSSSGVSSSSASVSESDQHQVQHTRITYKGDSGSYFFDGRNTMG 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0718 294 MobiDBLite consensus disorder prediction 188 216 - -
Mibi02g0718 294 Gene3D AP2/ERF domain 119 179 IPR036955 GO:0003700|GO:0006355
Mibi02g0718 294 MobiDBLite consensus disorder prediction 92 120 - -
Mibi02g0718 294 MobiDBLite consensus disorder prediction 20 39 - -
Mibi02g0718 294 FunFam Ethylene-responsive transcription factor 2 119 178 - -
Mibi02g0718 294 PRINTS Ethylene responsive element binding protein signature 143 159 IPR001471 GO:0003700|GO:0006355
Mibi02g0718 294 PRINTS Ethylene responsive element binding protein signature 121 132 IPR001471 GO:0003700|GO:0006355
Mibi02g0718 294 Pfam AP2 domain 120 169 IPR001471 GO:0003700|GO:0006355
Mibi02g0718 294 MobiDBLite consensus disorder prediction 41 69 - -
Mibi02g0718 294 SUPERFAMILY DNA-binding domain 120 178 IPR016177 GO:0003677
Mibi02g0718 294 CDD AP2 120 178 IPR001471 GO:0003700|GO:0006355
Mibi02g0718 294 MobiDBLite consensus disorder prediction 249 279 - -
Mibi02g0718 294 SMART rav1_2 120 183 IPR001471 GO:0003700|GO:0006355
Mibi02g0718 294 ProSiteProfiles AP2/ERF domain profile. 120 177 IPR001471 GO:0003700|GO:0006355
Mibi02g0718 294 PANTHER DNA-BINDING DOMAIN 58 262 IPR044808 GO:0003700|GO:0009873
Mibi02g0718 294 MobiDBLite consensus disorder prediction 176 216 - -
Mibi02g0718 294 MobiDBLite consensus disorder prediction 249 282 - -
Mibi02g0718 294 MobiDBLite consensus disorder prediction 20 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0718 Mibi-ChrMibi02 6910527 6912190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0718 105 180 AP2-EREBP Transcription Factor Family AT5G61890 82.895 2.96e-39 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi02g0718 AP2 5.6e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g0718 02 6910527 6912190 Mibi02g0718 02 6910527 6912190 ECH
Mibi09g0466 09 6051260 6054317 Mibi02g0718 02 6910527 6912190 ECH