Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0717 ATGGCGAATCTGTTATTTCTTTTGCTGTTTCTTTTTGGAGCAATCTTTCGTGGGCAATCCAAATTCATAGTGTATAACACATCGCAGAGCATTGTTCCCGGTAAGTTAAACGTTCATCTGGTTCCTCATACCCACGATGACGTTGGTTGGTTGAAGACTGTTGATCAGTACTATGTTGGCTCTAATAATTCGATTCAGGGAGCTTGTGTTCAAAATGTACTAGATTCTTTAGTTCCTTCGCTGTTGTCTGACAAGAATCGGAAATTTATCTACGTTGAGATAGCCTTTTTTCAGCGATGGTGGAGGGACCAGAGTGAAGCTGTTAAGCATGTGGTTAAGCAACTTGTTAGTTCGGGTCAATTAGAGTTCATAAATGGTGGCATGTGCATGCATGATGAGGCAGCAACACATTACATAGACTTGATTGATCAGACAACAATGGGACATCGGTTCTTGAAAGAGGAGTTTGGTGTAACTCCTAGAATTGGTTGGCAAATTGACCCCTTTGGACATTCTGCTGTGCAAGCATACCTATTGGGATCCGAAGTTGGCTTTGACTCACTTTACTTTGGTCGAATAGATTATCAAGATAGAGCTAAGCGTAAAAATGAAAAGAGTCTTGAAGTTATCTGGCAGGGAAGTAAGAGTCTCGGCTCGTCTGCTCAGATCTTTGCTGGTGCATTCCCTGAGAATTATGAGCCACCTGCTGGATTTTACTTTGAAGTTAACGATGATTCACCAATTGTTCAAGATAACATTGATTTATTTGATTATAATGTCCAAGAACGAGTAAATGACTTTGTTGCTGCTGCTGTATCACAGGCAAACATAACTCGAACAAATCATATAATGTGGACTATGGGGACTGATTTTAAGTATCAATACGCTCACACATGGTTCCGGCAGTTGGACAAGCTTATTCACTATGTTAACAAGGATGGACGTGTCAATGCCCTCTACTCTACACCATCTATTTATACTGATGCAAAATATGCTACAAAAGAGACATGGCCATTAAAGATTGATGATTTCTTCCCCTATGCAGATCGAGTAAATGCTTACTGGACGGGATACTTTACCAGTAGGCCAGCCTTAAAATACTATGTCAGATTAATGAGTGGCTACTATTTGGCGGCAAAACAGCTTGAACATTTTAAGGGGAGGATGAATCCAGGGCCAAATAGTGATTCATTGGCTGATGCTTTGGCGATTGCTCAACACCATGATGCAGTCTCTGGTACAGAAAAGCAGCATGTGGCCAATGATTATGCTAAAAGATTATCAATTGGCTACAAAGAGGCAGAGCAATTGGTTGCATCATCTCTAGCTTGCCTGGTTGAGTCTGTGTCATTTACTGGATGTCAGAACCCAGTTACTAAGTTTCAACAATGTCCGCTTATGAATATAAGTTACTGTCCTCCATCAGAAGTTGATATGACTCAAGGGAAAAAATTGGTGATTGTGGTTTACAACTCCATTGGCTGGAAGAGGAATGAAGTGGTTCGAATTCCAGTCACAAATGAAGATCATATAGTTTATGATTCAGAGGGTAAAGAAATAGTATCACAACTTCTACCTCAGGCTGAGGTCTATGCACCCTTAAGGAGCTACCATGTCATGGCATATCTGGGAGAAACTCCAGCCAAGGCGCCCAAGTATTGGCTTGCATTTACAGCATCTGTGCCACCTCTTGGTTTTAGCACTTACACAGTCTCAGCTGCCAAAAGGATAGGTTCCACCAGATCATCAGTGTATACATATCAAACTAGTGAAACATCCAAAATTGAAGTTGGTCAAGGGAATTTGAGGCTTACATTTTCCCCAAACCAAGAAAAATCTGCCAACTATTTTAATACCAGGAACTTGGTTGGGGAACAGATTAAACAGAGGTATTTGTACTACTCAGGATATAATGGAACCGATGATAAAGTGCCACAGAATTCTGGTGCCTATGTATTCCGTCCAAATAACACTTATCCCTTAAAGCATGAAAGACAGGTTCCATTGACTGTTATGCGTGGGCCTTTACTAGATGAAGTACATCAACAGATAAATCCATGGATATATCAGATTACCAGACTGCACAAGGAAAAAGAGCATGTTGAAGTAGAGTTTATTGTTGGCCCCATACCTATTGATGATGGAATTGGTAAAGAAGTTGTCACTAGGATTTCAACCTCAATGGAAACTAACAAAACATTCTACACAGATTCTAATGGGCGTGATTTTATCAAAAGGATACGTGATTTCAGATCAGACTGGGACCTGGAAGTGAACCAGCCTATTGCTGGAAACTATTATCCTATCAATCTTGGGATATATGTAAAAGATAACAAGACAGAATTTTCAGTTTTGGTGGATCGATCTGTAGGAGGATCCAGCTTAGCTGACGGAGAAATAGAGCTAATGGTTCACAGGAGATTGCTACTTGATGATTCAAGAGGTGTTGCAGAGGCTTTAAATGAAACCGTCTGTGTTGTTGATGATTGCAGAGGCCTAATAATTCAAGGAAAAGTATACTTTAGAATAGACCCCCTGGGTGAGGGTGCTAAGTGGCGTCGGACAGTTGGCCAGGAAATATATTCTCCACTACTCTTGGCCTTTTCTGAACAGGATGGAGATGACTGGATGAATTCCCATATTCTTACATATTCGGGAATTGATTCTAATTACAGTTTACCAGACAACGTTGCAATTATAACCTTACAGGAACTAGACGATGGAAAAGTTCTCCTTCGGTTAGCACATCTATATGAGATTGACGAGGACAAGGATCTCTCTGCAATGGCAAGTGTGGAGCTGAAAAAGTTGTTCCCAAGGAAAAAGATCAAAGAGGTGAAAGAGATGAGCTTATCTGCGAATCAAGAAAGGACAGAGATGGAGAAAAGAAGACTCAAGTGGAAAGTAGAAGGCTATTCTGGTTCTGGGGACGAACGTGTTCTTAGGGGAGGGCCTGTTGATCCGAAAGAGCTATCAGTGGAGCTAGGTCCAATGGAAATCCGCACCTTCATCGTTTACTTTGAACATAAATTTGACATAAAAAGTATTTGA 3051 0.4081 MANLLFLLLFLFGAIFRGQSKFIVYNTSQSIVPGKLNVHLVPHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDSLVPSLLSDKNRKFIYVEIAFFQRWWRDQSEAVKHVVKQLVSSGQLEFINGGMCMHDEAATHYIDLIDQTTMGHRFLKEEFGVTPRIGWQIDPFGHSAVQAYLLGSEVGFDSLYFGRIDYQDRAKRKNEKSLEVIWQGSKSLGSSAQIFAGAFPENYEPPAGFYFEVNDDSPIVQDNIDLFDYNVQERVNDFVAAAVSQANITRTNHIMWTMGTDFKYQYAHTWFRQLDKLIHYVNKDGRVNALYSTPSIYTDAKYATKETWPLKIDDFFPYADRVNAYWTGYFTSRPALKYYVRLMSGYYLAAKQLEHFKGRMNPGPNSDSLADALAIAQHHDAVSGTEKQHVANDYAKRLSIGYKEAEQLVASSLACLVESVSFTGCQNPVTKFQQCPLMNISYCPPSEVDMTQGKKLVIVVYNSIGWKRNEVVRIPVTNEDHIVYDSEGKEIVSQLLPQAEVYAPLRSYHVMAYLGETPAKAPKYWLAFTASVPPLGFSTYTVSAAKRIGSTRSSVYTYQTSETSKIEVGQGNLRLTFSPNQEKSANYFNTRNLVGEQIKQRYLYYSGYNGTDDKVPQNSGAYVFRPNNTYPLKHERQVPLTVMRGPLLDEVHQQINPWIYQITRLHKEKEHVEVEFIVGPIPIDDGIGKEVVTRISTSMETNKTFYTDSNGRDFIKRIRDFRSDWDLEVNQPIAGNYYPINLGIYVKDNKTEFSVLVDRSVGGSSLADGEIELMVHRRLLLDDSRGVAEALNETVCVVDDCRGLIIQGKVYFRIDPLGEGAKWRRTVGQEIYSPLLLAFSEQDGDDWMNSHILTYSGIDSNYSLPDNVAIITLQELDDGKVLLRLAHLYEIDEDKDLSAMASVELKKLFPRKKIKEVKEMSLSANQERTEMEKRRLKWKVEGYSGSGDERVLRGGPVDPKELSVELGPMEIRTFIVYFEHKFDIKSI 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0717 1016 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 896 1004 IPR041147 -
Mibi02g0717 1016 Pfam Glycosyl hydrolases family 38 C-terminal domain 600 814 IPR011682 GO:0004559|GO:0006013
Mibi02g0717 1016 Gene3D Glycoside hydrolase family 38, central domain 317 394 IPR037094 GO:0004559|GO:0006013
Mibi02g0717 1016 Coils Coil 943 963 - -
Mibi02g0717 1016 SUPERFAMILY Galactose mutarotase-like 455 1007 IPR011013 GO:0003824|GO:0005975|GO:0030246
Mibi02g0717 1016 FunFam Alpha-mannosidase 395 450 - -
Mibi02g0717 1016 FunFam Alpha-mannosidase 473 596 - -
Mibi02g0717 1016 SMART Alpha_mann_mid_2 353 427 IPR015341 GO:0004559|GO:0006013
Mibi02g0717 1016 SUPERFAMILY Glycoside hydrolase/deacetylase 25 349 IPR011330 GO:0005975
Mibi02g0717 1016 FunFam Alpha-mannosidase 596 862 - -
Mibi02g0717 1016 SUPERFAMILY Families 57/38 glycoside transferase middle domain 352 446 IPR028995 -
Mibi02g0717 1016 CDD GH38N_AMII_LAM_like 36 312 - -
Mibi02g0717 1016 Gene3D - 472 596 IPR013780 -
Mibi02g0717 1016 Gene3D - 882 1012 - -
Mibi02g0717 1016 Pfam Alpha mannosidase middle domain 353 445 IPR015341 GO:0004559|GO:0006013
Mibi02g0717 1016 FunFam Alpha-mannosidase 36 316 - -
Mibi02g0717 1016 Gene3D Glycoside hydrolase 38, N terminal domain 36 316 IPR027291 -
Mibi02g0717 1016 PANTHER ALPHA-MANNOSIDASE 7 1009 - -
Mibi02g0717 1016 FunFam Alpha-mannosidase 315 394 - -
Mibi02g0717 1016 Pfam Glycosyl hydrolases family 38 N-terminal domain 37 348 IPR000602 GO:0004559|GO:0006013
Mibi02g0717 1016 Gene3D Glycoside hydrolase family 38, central domain 395 451 IPR037094 GO:0004559|GO:0006013
Mibi02g0717 1016 Gene3D - 597 862 - -
Mibi02g0717 1016 FunFam Alpha-mannosidase 882 1009 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0717 Mibi-ChrMibi02 6876821 6896184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0717 1 919 Glycoside Hydrolase AT5G13980 71.243 0.0 1389