Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0710 ATGGCTCTCTCCACCTCCACCACCGCCCTCTCCCTCATCGTCATCTGTCTCCTCATCCTCCCACTCTCTCCTGCGTCATCCCGTAGCCCTAAAGGTTTCCGCCTCTCCCATGCCATCTTCAACTACCTCGACCTCTCTTACGACGATCTCTCCTCCTCGCCTTTGCTTCTCAATCCCCCCACGAAAGGGAAAAGGAAAAAAAGCGGCGCCGATAAAATAAGCCGCGCAGTACATAATGATATTGGTAAAGTGAACAATAGCCGTTCATTTTCATCGCATAAAGTTCAAACTCCAAAATCCTTCCCCTTCATTTTTTATCACCGGCATACCGCCATTCTCATCGAAACACACTCGCTCTTTCTTCTCTGCTCTCTCTCGCCCTCTGTGTCAATGGCGGGAGAGATGCCACCAATGGCTAACGTCGTCCCTTGGTTGGAAGGAAAAGTTGAAGATGAAGCTTCTTGGACCAGAACTAACAACGACGGTGAGCTCAAGGAAGACGACATTGTTCTGAATGGCCCTCTAACCTCCTTCAAATCCATGCTCGAAGCTGACTGGTACATGAATTCTGCTTTAAATTTCGCTCACCAAGACCTCCTCACTCTCCCCAATCCCCAAGAAACCACTGATAATATCGTCTTTTGTTCAAACCCACCTGATAGCTTTCTAGTACAACCCGTGGATTCGTCGTCGTCCTGTTCACCATCGTTCGCTCTTGACCCATCTCAGTCACAACACTTTTTACATCCCAAATCTTCTTTCCCTTCCCTCCTTAATGTCATTTGCGACAACCCTTTTGACAGTGGTTTCGATTTGAGCTCTGACGGTGGGTTCCTCGGTCCGTTCCGTGGAATCCATCCTTTGAATTCCCCTGTTTTTGCCGATTTCTCGGGCTTCAATACTCAATCTCAAATGGGGAACTTCGAAATGAGTTCAACCTCTGAGTTTCTCGCTTCTCGGCTGCTCCCAGCAGCTGACAATGCCGTCTCATTAGGAGGGTTTGATAATCCGGGAGGGGCACTTTTGTTGAACCGGTCTAAGGTTTTGCGACCTCTTGAAGTTTCACCTCCAGTGGGCGCGGCGCCTACTCTTTTTCAGAAGCGAGCAGCATTTCGCAATAATTCACTTGGAACTGACAGATTGAGAACTTTGGAGATTTCGGCGTCGAGGTTCGAAAATTTTTCTACAAGGTTGGAGAACATGGAGAGGAAGAGAAAGGGGGTCGAGGAAGGGGAAATTGAGGAAGCTTCCATAGATGCATCAGGGCTGAACTATGATTCTGATGAGCTTAATGAGAATGGTAAGATGGAGGAGATTGCTTATAATGTTGGGACCAATTCTAATGCCAATAGTTCTGTCACTGGTGGAGACCAGAAGGGGAAGAAAAAAGGGCAACCAGCCAAAAATCTGATGGCCGAGAGGCGGCGAAGAAAGAAACTAAATGATAGGTTGTACATGCTGAGGTCAGTTGTGCCGAAGATTAGCAAGATGGATAGGGCTTCGATACTTGGGGATGCAATTGACTACTTGAAGGAGCTTCTGCAGCGGATTAACGATCTTCATAACGAGCTGGAGTCAACTCCACCTGGCTCATTGCCACCGCCTTCTACAAGCTTTCACCCTTTGACACCCACCCCACCAACACTTCCCAGTCGAGTCAAGGAAGAGCTTTGCCCGAGCTCCTTGCCAAGCCCTAAAAACCAAGCTGCAAGGGTGGAGGTTAGAGTAAGGGAAGGGAGAGCTGTCAACATCCATATGTTTTGTGCCCGCAGACCAGGTCTTTTGCTTTCCACCATGAGGGCTTTGGACAACCTTGGGTTGGATGTTCAGCAGGCCGTTATCAGTTGTTTCAATGGCTTTGCATTAGATGTGTTCAGAGCAGAGCAATGCGGAGAAGGGCTAGACATGGTCCCTGAGCAAATCAAATCGGTACTGTTGGATTCAGCCGGTTTCCATGGTAATATGATATAA 1971 0.4825 MALSTSTTALSLIVICLLILPLSPASSRSPKGFRLSHAIFNYLDLSYDDLSSSPLLLNPPTKGKRKKSGADKISRAVHNDIGKVNNSRSFSSHKVQTPKSFPFIFYHRHTAILIETHSLFLLCSLSPSVSMAGEMPPMANVVPWLEGKVEDEASWTRTNNDGELKEDDIVLNGPLTSFKSMLEADWYMNSALNFAHQDLLTLPNPQETTDNIVFCSNPPDSFLVQPVDSSSSCSPSFALDPSQSQHFLHPKSSFPSLLNVICDNPFDSGFDLSSDGGFLGPFRGIHPLNSPVFADFSGFNTQSQMGNFEMSSTSEFLASRLLPAADNAVSLGGFDNPGGALLLNRSKVLRPLEVSPPVGAAPTLFQKRAAFRNNSLGTDRLRTLEISASRFENFSTRLENMERKRKGVEEGEIEEASIDASGLNYDSDELNENGKMEEIAYNVGTNSNANSSVTGGDQKGKKKGQPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPPGSLPPPSTSFHPLTPTPPTLPSRVKEELCPSSLPSPKNQAARVEVRVREGRAVNIHMFCARRPGLLLSTMRALDNLGLDVQQAVISCFNGFALDVFRAEQCGEGLDMVPEQIKSVLLDSAGFHGNMI 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0710 656 FunFam BHLH transcription factor 460 528 - -
Mibi02g0710 656 Gene3D - 457 527 IPR036638 GO:0046983
Mibi02g0710 656 CDD ACT_UUR-ACR-like 584 644 - -
Mibi02g0710 656 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 338 651 - -
Mibi02g0710 656 MobiDBLite consensus disorder prediction 524 564 - -
Mibi02g0710 656 MobiDBLite consensus disorder prediction 445 475 - -
Mibi02g0710 656 CDD bHLH_AtAMS_like 467 538 - -
Mibi02g0710 656 MobiDBLite consensus disorder prediction 528 548 - -
Mibi02g0710 656 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 464 513 IPR011598 GO:0046983
Mibi02g0710 656 Coils Coil 507 527 - -
Mibi02g0710 656 MobiDBLite consensus disorder prediction 461 475 - -
Mibi02g0710 656 SMART finulus 470 519 IPR011598 GO:0046983
Mibi02g0710 656 Pfam Helix-loop-helix DNA-binding domain 469 513 IPR011598 GO:0046983
Mibi02g0710 656 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 465 535 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0710 Mibi-ChrMibi02 6850101 6855446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0710 154 628 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 54.637 2.33e-146 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi02g0710 HLH 1.7e-09 No_clan