Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0701 ATGCAAGGGAATCTGTCCTGTTGTAGGGAAATCTATCCATCTCAGTTTAGTCTTGAGACAATTTTTTGTATAGCTGCAGCTGTAGTTGTCCCCGTGTCTTGTGCTTGTTCATTGGAAACTAGAAGTTGCTTGTATATGAGGGATCACTTTAGAGAATTGGATTTTCGATATTGGTGGGTGTATCTTGTCACATTTGGGCACCTTTTTCTTAATAATTTTTTAAATATAAAATCCCCTGAGGATGCATGTAACAGTACCAACGGCCTGTTCACTATAATCCCATTCTCTCTCTCTCCCTCTCCCCTTTCCTCTGTCTCTGTGATCAGAGCTACAATGGCCACCAGATACTGGGTAGTCTCTCTCCCCGTTCAAAATTCCGCATCTGCTCTCTGGGCTCAATTGCAGGAACAAATCTCCAAGCACTCCTTCGATACTCCTCTTTACAGATTCAATATTCCTAATCTTCGGGTCGGAACCCTAGATTCTCTTCTTTCTCTCAGCGATGATCTTGTCAAGGCAAACAGTTTCATGGAAGGAGTGTCACACAAGATCAGGCGACAGATTGAGGAATTGGAGAAAGTTTCGGGCGTTGTGAGCAGCGGGCTGACGGTTGATGGGGTGCCGGTCGATTCTTACTTGACCAGGTTTGTTTGGGATGAAGCCAAGTACCCGACTATGTCACCTTTGAAGGAGATTGTGGATGGTATTCACGGTCAAGTGGCAAAGATTGAGGATGATCTGAAGGTTCGTGTGGCTGAGTATAACAATATCCGCAGTCAACTAAATGCTATCAACCGAAAGCAAAGCGGAAGCTTAGCTGTCCGTGATCTTTCCAACCTGGTAAAACCTGAGGATATTATTACTTCGGAGCATTTAACTACCCTACTTGCAATCGTTCCTAAGTATTCTCAAAAGGACTGGCTCTCAAGCTATGAAACTTTGACGAGCTATGTGGTACCCAGGTCTTCCAAGTTGTTGTATGAGGATAATGAGTATACTCTTTATACCGTAACACTCTTCACACGTGTCGCAGACAATTTTAGAACTAGTGCACGTGAGAAAGGGTTCCAAATTCGTGATTTTGAGTATAGTCAAGAAACACATGAAGGTCGGAAGCAGGAGCTGGAGAAGTTGGTGCAAGATCAGGAAAGCACAAGAGGAATTCTTTTGCAGTGGTGTTATAACAGTTATGGAGAGGTTTTCAGCTCCTGGATGCACTTTTGTGCTATACGTGTATTTACAGAGAGCATTCTGAGATATGGTTTGCCACCATCTTTCCTGGCAGCTGTCTTATCTCCGTCTGCAAAAAGTGAGAAGAAAGTACGTTCTATACTTGAAAGCTTGAGTGACAGTACAAACAGTGCATACTGGAAGATTGAGGATGAAGCAGGGGGTGGTATGCCCGGTTTAGCTGGGGATTCTGATGCCCATCCATACGTCTCCTTCACTATCAATCTTGTGTGA 1464 0.4392 MQGNLSCCREIYPSQFSLETIFCIAAAVVVPVSCACSLETRSCLYMRDHFRELDFRYWWVYLVTFGHLFLNNFLNIKSPEDACNSTNGLFTIIPFSLSPSPLSSVSVIRATMATRYWVVSLPVQNSASALWAQLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLSLSDDLVKANSFMEGVSHKIRRQIEELEKVSGVVSSGLTVDGVPVDSYLTRFVWDEAKYPTMSPLKEIVDGIHGQVAKIEDDLKVRVAEYNNIRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEHLTTLLAIVPKYSQKDWLSSYETLTSYVVPRSSKLLYEDNEYTLYTVTLFTRVADNFRTSAREKGFQIRDFEYSQETHEGRKQELEKLVQDQESTRGILLQWCYNSYGEVFSSWMHFCAIRVFTESILRYGLPPSFLAAVLSPSAKSEKKVRSILESLSDSTNSAYWKIEDEAGGGMPGLAGDSDAHPYVSFTINLV 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0701 487 Pfam V-ATPase subunit C 116 480 IPR004907 GO:0033180|GO:0046961|GO:1902600
Mibi02g0701 487 Gene3D Vacuolar atp synthase subunit c; domain 1 117 446 - -
Mibi02g0701 487 SUPERFAMILY Vacuolar ATP synthase subunit C 112 486 IPR036132 GO:0015078|GO:0033180|GO:1902600
Mibi02g0701 487 CDD V-ATPase_C 116 484 IPR004907 GO:0033180|GO:0046961|GO:1902600
Mibi02g0701 487 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 113 486 IPR004907 GO:0033180|GO:0046961|GO:1902600
Mibi02g0701 487 Coils Coil 365 385 - -
Mibi02g0701 487 Gene3D - 274 362 - -
Mibi02g0701 487 Gene3D - 152 423 - -
Mibi02g0701 487 FunFam V-type proton ATPase subunit C 274 362 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0701 112 486 Primary Pumps ATPases(2) AT1G12840 82.400 0.0 646
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g0701 02 6813828 6818425 Mibi02g0701 02 6813828 6818425 ECH