LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi02g0661	ATGGAGACCTACCCTTTGTTATTCCCTTCAATGTCCACCAGTACTACTGCCATGGGAAGCTCTAATCATCAACTACTTCGTGGTTTGAGCAATAACATGGATCAGGATGCTCAGATTACTAACCCTAGTAGTACCTTCCTGGGTTTGAGTCGTACTGCTACAGCTGAAAATGATGAAAGCTTAATTAGGAAAAATGATAATGATAAGGAGCAGCAAGGTGGTTCTGGGAAGAAGAAGGGTGAGAAGAAGGCGCGTAAGCCTAGGTATGCTTTTCAAACAAGGAGTCAGGTTGATATTCTGGATGATGGCTATCGCTGGAGAAAATATGGCCAGAAAGCTGTCAAAAACAACAAATTCCCCAGGAGCTACTACAGGTGTACGCATCAAGGGTGTAACGTGAAGAAGCAAGTGCAAAGGCTAACCAAAGACGAGGGCGTAGTGGTGACCACGTACGAGGGAGTTCACAATCATCCCATTGAGAAGACCACTGACAACTTTGAACACATTTTGAGTCAAATGCAAATATATACTACCTTTTAA	540	0.4333	METYPLLFPSMSTSTTAMGSSNHQLLRGLSNNMDQDAQITNPSSTFLGLSRTATAENDESLIRKNDNDKEQQGGSGKKKGEKKARKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHNHPIEKTTDNFEHILSQMQIYTTF	179

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi02g0661	179	FunFam	WRKY transcription factor 57	86	160	-	-
	Mibi02g0661	179	ProSiteProfiles	WRKY domain profile.	95	160	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Mibi02g0661	179	SMART	WRKY_cls	100	159	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Mibi02g0661	179	SUPERFAMILY	WRKY DNA-binding domain	92	159	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Mibi02g0661	179	MobiDBLite	consensus disorder prediction	57	78	-	-
	Mibi02g0661	179	MobiDBLite	consensus disorder prediction	57	88	-	-
	Mibi02g0661	179	PANTHER	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	38	162	IPR044810	GO:0003700
	Mibi02g0661	179	Pfam	WRKY DNA -binding domain	101	158	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Mibi02g0661	179	Gene3D	WRKY domain	83	159	IPR036576	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi02g0661	Mibi-ChrMibi02	6442191	6443169	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi02g0661	88	179	WRKY Transcription Factor Family	AT5G13080	88.043	8.60e-60	181

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Mibi02g0661		WRKY	1.9e-26	CL0274