Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0660 ATGGACTGGGATTGGAAAGATTTGGCGTGGGATCCGTCCGGGTCGGAGCTATCAAATGGAGCAGCTTCAGTGGATTTGAGTCTCGGAGAAACTTCTGATATCTCAGAAAAACCTAAGGACTTAGCCAAAGACTCGAAATTGGAATCATCTCCGCGTGGTTCGTCCAAGAGGAGCCGTACAATGAATGGATCGGTGCAGAGTGTGTCGTGCTCGGTGGATGGATGTGACTCCGACCTGAGTGGTTGCAGAGAGTATCACCGGCGACATAGAGTGTGTGAGAAGCACTCCAAGACGCCCATTGTGTTGGTTGGGGGAAAACAGCAGCGATTTTGCCAGCAATGCAGCAGATTTCATTCTCTTGGTGAGTTTGATGAAGTTAAGAGGAGTTGCAGGAAACGGCTTGATGGACATAACAGGCGCCGGAGGAAGCCTCAGCCGCCTTCTCTTTTCATGGCTGCTGAGAAATTCCTGAGCGGTTACAAAGGGCCAAGAATCCTTCATTTTGGAAGTCCTCAGACTTACAACGCCCCGTTTTTTAGAAGTATGTGGCCTGCCACTGGCAAAGCTGGAGCTGAACCGATGATGATCAGTTATGACCAAAACAGTCTGCGAAGTTCGTTTGCTAATGTAGAGCATCAGCAGGATAAGCAACTTCCTCTCTTTGGGTTTAACAGCTCTAAAGCAGGCCATTGCAAGGAGGCTGTGTCTGGAATTCCCTTGAGACAAGCAACTTCTGGTGCCGCTGCCCCATCAGTGAGTGCAAATGGTGGCCGGAAGCTCGCTTCTGATTTCAAGCCTGGACCTTTTGATTCAGATTGTGCTCTCTATCTTCTGTCAACACTTCAGACACAAAGTCAAGAGTTAAGCTTGGTGCAGTCCACCATGAACTGTCCGGTGCAATCGTCTCCATTAGAAGATTTGCATTTTGATGCTGGGGACAAGTACTCATCATGCTCAGAAAGTCCACAAGAAAAGTCTACCAGTCCTTTATTGGTTGTGGATGCCGACACAACTGGCCTTCATTGCGACCGTATGATTCACATGAGGCCTGATGACATTGTGGAAAATGGAGACTTGCCAACCTTTCCATTTTTCTGGGAGTAG 1104 0.4846 MDWDWKDLAWDPSGSELSNGAASVDLSLGETSDISEKPKDLAKDSKLESSPRGSSKRSRTMNGSVQSVSCSVDGCDSDLSGCREYHRRHRVCEKHSKTPIVLVGGKQQRFCQQCSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPPSLFMAAEKFLSGYKGPRILHFGSPQTYNAPFFRSMWPATGKAGAEPMMISYDQNSLRSSFANVEHQQDKQLPLFGFNSSKAGHCKEAVSGIPLRQATSGAAAPSVSANGGRKLASDFKPGPFDSDCALYLLSTLQTQSQELSLVQSTMNCPVQSSPLEDLHFDAGDKYSSCSESPQEKSTSPLLVVDADTTGLHCDRMIHMRPDDIVENGDLPTFPFFWE 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0660 367 SUPERFAMILY SBT domain 68 149 IPR036893 GO:0003677|GO:0005634
Mibi02g0660 367 MobiDBLite consensus disorder prediction 32 53 - -
Mibi02g0660 367 MobiDBLite consensus disorder prediction 54 74 - -
Mibi02g0660 367 FunFam Squamosa promoter-binding-like protein 14 61 131 - -
Mibi02g0660 367 ProSiteProfiles Zinc finger SBP-type profile. 67 144 IPR004333 GO:0003677
Mibi02g0660 367 MobiDBLite consensus disorder prediction 28 74 - -
Mibi02g0660 367 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 13 302 IPR044817 GO:0003677
Mibi02g0660 367 Gene3D - 61 131 IPR036893 GO:0003677|GO:0005634
Mibi02g0660 367 Pfam SBP domain 70 143 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0660 Mibi-ChrMibi02 6420790 6422535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0660 63 168 SBP-box Gene Family AT5G50670 65.094 2.00e-44 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mibi02g0660 SBP 8.3e-31 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g0660 02 6420790 6422535 Mibi02g0660 02 6420790 6422535 ECH