Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0642 ATGGCGGGAGAGTATTCTTCTACCACTTGGTCTTCTCCTTCTTCTCTTCCAGGTAACCAAAAATGCTGGAGGAAGCAAGTGGATGAGAATCTCAAGAGGCTTCACTCTCTTCTCTTCGGTGCCGATCTTGCCCTTCAGAAACATGATTTCGAGTCCGCCTACATCCTCGGCCTTCGCCTCATCGGCTTCCTCGACTCTCACTGCCACTCCGATGTCGATGAAGCCTATATCCGTCCAATTCGACGTCAAGTCTTGGCCAAAATTGACACCGCTCGTCGATCCCTCATTCCCGACTCTGATCTCCAAGCGTTTGAACAAGCCAAAAAGTCCCCAGGGTGTATTTTTGGCAAAACAGGAGATATTGACATTGGGAAAATTAAGAAGTCGAAGTACTTCCAAGCTCTTCTCAAGGAATCCAAAGAAAAGGGCCATCATCTGGAGAAGCAGGACAAAGCAGGTAGCAAAATGCCAAAACAATCGTTGCAAACAAAGTTAACATCAATGTATGGGAAAAGTACACTGAGGGCTAGTAGTAATTCCAAATTGAGTTTGAAACCTAACAGATCTGAGGACTGCATGATTGTTGAAAAGCCTATGTCACACGGTGGCCATAGTAAGGGTCATCCTGTCTCTCCTTTCTTGAAAACTGAAGGGGAAGAAAGAACTTCTGGAACTTTGGGAAAAAAGCGTGTGCTCTTGGAAACTAATAGCCCCCAAGTTAGCAACGTGAAGTCACCTTCAAGCAATGAAGAATCTAAGTCTGGTACTTGTGGCCGTGGATTTGTTACAGCCAGAGCTAAATTGGAAATGGAAACAAGGCAGAGGCGAGAAGGGATTGGTTCACCCACTGCATCTGTCTCACAATATGATATCAATTCTTCGAATCGGGTATACGGTGGGAGGTCATATGGTGTTTCACGACGTGGTGTCCGTGGTAATTTTGTACCTCCCATTAAATCTAATGGAACTGGCGATGGAAATATGACATCAAGAATTGGAAAGGGTGATGATACTTTAGATGACTCAACAAAGAGATGTTTGGAAGGGCTATGTGGTCCTGACGGAGAGCTTCCTGAGAAATTGAGGAATATAGAACCTCGGCTAATTGAACATATTAGCAATGAGATTATGGATAGAGATCCTAATGTCCGGTGGGATGACATTGCGGGATTGGAGCATGCGAAGAAATGTGTCACTGAGATGGTCATATGGCCTCTGCTACGTCCTGACATATTTAAGGGTTGCCGCTCTCCTGGGCGAGGTCTACTTTTATTTGGTCCACCGGGAACTGGTAAAACAATGATAGGAAAAGCCATAGCAGGGGAGGCAAAGGCAACCTTCTTTTACATCTCGGCAAGTTCACTGACAAGCAAGTGGATCGGAGAAGGTGAAAAACTAGTGAGAGCCCTCTTTGGAGTTGCCAGTTGTCGCCAGCCGGCTGTGATATTTGTGGATGAAATAGATTCTCTCCTATCTCAGCGTAAGTCAGAGGGTGAACATGAATCAAGTAGAAGGCTAAAGACACAATTTCTCATTGAAATGGAAGGTTTCGACAGTGGTAACGAGCAGGTTCTTCTTATAGGGGCCACCAACCGTCCCCAAGAGCTTGATGAAGCAGCACGGAGGCGACTTACCAAAAGACTTTATATCCCCCTGCCATCCTCAGAGGCAAGAGCCTGGATTATACGTAACCTCTTAGAGAAGGACGGGCTATTCAAGCTGACAAAAGAAGATATTGATACCATATGCTACAAAACAGAAGGATATTCGGGGTCAGACATGAAAAATTTAGTGAAGGATGCTTCAATGGGTCCCTTAAGAGAGGCTTTAAAGCAGGGCATAGAAATTACAAAGCTGAACAAGGAAGATATGCGGCCAGTGGCTCTTCAGGACTTTATGGATGCCCTAAAAGAGGTAAGACGATCTATTTCCTCAAATGAACTGGGCGCTTACGAAACATGGAACGAACAATTTGGAAGCCTATCATCGGAGAAGCTCGAGTCATTTGTATGA 2013 0.4516 MAGEYSSTTWSSPSSLPGNQKCWRKQVDENLKRLHSLLFGADLALQKHDFESAYILGLRLIGFLDSHCHSDVDEAYIRPIRRQVLAKIDTARRSLIPDSDLQAFEQAKKSPGCIFGKTGDIDIGKIKKSKYFQALLKESKEKGHHLEKQDKAGSKMPKQSLQTKLTSMYGKSTLRASSNSKLSLKPNRSEDCMIVEKPMSHGGHSKGHPVSPFLKTEGEERTSGTLGKKRVLLETNSPQVSNVKSPSSNEESKSGTCGRGFVTARAKLEMETRQRREGIGSPTASVSQYDINSSNRVYGGRSYGVSRRGVRGNFVPPIKSNGTGDGNMTSRIGKGDDTLDDSTKRCLEGLCGPDGELPEKLRNIEPRLIEHISNEIMDRDPNVRWDDIAGLEHAKKCVTEMVIWPLLRPDIFKGCRSPGRGLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQRKSEGEHESSRRLKTQFLIEMEGFDSGNEQVLLIGATNRPQELDEAARRRLTKRLYIPLPSSEARAWIIRNLLEKDGLFKLTKEDIDTICYKTEGYSGSDMKNLVKDASMGPLREALKQGIEITKLNKEDMRPVALQDFMDALKEVRRSISSNELGAYETWNEQFGSLSSEKLESFV 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0642 670 FunFam Fidgetin like 1 553 639 - -
Mibi02g0642 670 ProSitePatterns AAA-protein family signature. 524 543 IPR003960 GO:0005524|GO:0016887
Mibi02g0642 670 MobiDBLite consensus disorder prediction 198 257 - -
Mibi02g0642 670 FunFam Fidgetin-like 1 381 563 - -
Mibi02g0642 670 Pfam AAA+ lid domain 578 615 IPR041569 -
Mibi02g0642 670 Gene3D - 553 639 - -
Mibi02g0642 670 Gene3D - 381 655 IPR027417 -
Mibi02g0642 670 MobiDBLite consensus disorder prediction 309 339 - -
Mibi02g0642 670 Pfam ATPase family associated with various cellular activities (AAA) 422 552 IPR003959 GO:0005524|GO:0016887
Mibi02g0642 670 MobiDBLite consensus disorder prediction 142 162 - -
Mibi02g0642 670 SMART AAA_5 418 554 IPR003593 -
Mibi02g0642 670 MobiDBLite consensus disorder prediction 229 256 - -
Mibi02g0642 670 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 381 658 IPR027417 -
Mibi02g0642 670 CDD AAA 415 552 - -
Mibi02g0642 670 PANTHER AAA DOMAIN-CONTAINING 160 660 - -
Mibi02g0642 670 Pfam Vps4 C terminal oligomerisation domain 625 659 IPR015415 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0642 Mibi-ChrMibi02 6264316 6269410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0642 337 661 Calmodulin-binding Proteins AT3G56690 32.059 4.60e-41 159