Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0610 ATGGTGAGGGAAGAACAAAAACGGAGCCCGCAGAACCAGAAGAAGCCATCGAGGGAAACAAAGGCATCGGAAAATGGAGACATATCGGGCGTAATGTTCAGCCCCAGATTCAAATCTGCGGCTGCTTTGGCTGGTTGGGATGAGGAGGCCCTTCTATTCGCCAGTCTCGTCGTCCAAGACACCCCCGATAGGATTTTGAAGCATCATGAACCCTCTGATCCTAACATCAAGACTCCACCCACTAATTCAACAAGGAAACGCCGAGCTCAGAGGAGTCCACTTTCTTCAATCCCGGCAACTGTTCTTGACCTTGACCAAGATGAAACTCCCAGAAAGGATAGTGTAAAGAAGAGGAAAGGGAACAGGGCTAGTGCTAACGAAGCGGCAGGGAATATTTTGACCCAGCAGACCTCTGCTTCTTCTTCTTCTTCTTCGGGATCTGTTCTTCCCTGTATTGATAAGCTCAGGGAGGAGCTTACCTGTGCGATTTGTTTGGAGATATGCTTTGAACCAAGTACTACTCCTTGTGGACACAGCTTTTGCAGAAAATGCCTTCGATCTGCAGCGGATAAATGTGGAAGAAAGTGCCCAAGGTGCAGGCAACTGATTAGTAATGGACGATCTTGCACAGTGAACACAGTTCTTTGGAACACAATACAGCTCCTTTTTCCCAAGGAAGTGGAAGAAAGAAAAGCAGCAGGTGCCTTGAATATACGAGAAGCTCAGAAGCGCGCGAGCCCAGAAACGGCATTCTATAACAACCTAAGGGTAGGTCGAACCACACAAACAGTCGAGGCTCCAAACAGAAGTACAAGAAGTCAGAGGAGAAGGGTGATGATCACAACAATCCAAGATGAGGAGGATGAAGATGCTGCATTGGCAAGAAGGTTGCAGATGGAGGAAAATGGGGCTGTTCATAATAATAATAATAATTCAAGGAATCAGACACCATCATCATCTTCTTCGAGGAGGTCTAGAAGAATGATAACGAGCCAAGATGAGGATGCTGCTTTTGCTCTGAGATTGCAGAGGGAAGAGTTTATGCAGGTTTTTAGGGGAAGCCAAGCACGTTCGGTCACAACTGGGCCAGTGTCTATGTCTTCAGCCAGAGCAAATTTGAGGGCCATGGCTTCCAGGGCCAGCCTTCGAGTTAGAGACCGTAGATTATGA 1170 0.4744 MVREEQKRSPQNQKKPSRETKASENGDISGVMFSPRFKSAAALAGWDEEALLFASLVVQDTPDRILKHHEPSDPNIKTPPTNSTRKRRAQRSPLSSIPATVLDLDQDETPRKDSVKKRKGNRASANEAAGNILTQQTSASSSSSSGSVLPCIDKLREELTCAICLEICFEPSTTPCGHSFCRKCLRSAADKCGRKCPRCRQLISNGRSCTVNTVLWNTIQLLFPKEVEERKAAGALNIREAQKRASPETAFYNNLRVGRTTQTVEAPNRSTRSQRRRVMITTIQDEEDEDAALARRLQMEENGAVHNNNNNSRNQTPSSSSSRRSRRMITSQDEDAAFALRLQREEFMQVFRGSQARSVTTGPVSMSSARANLRAMASRASLRVRDRRL 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0610 389 MobiDBLite consensus disorder prediction 302 326 - -
Mibi02g0610 389 SMART ring_2 161 199 IPR001841 -
Mibi02g0610 389 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 106 230 IPR013083 -
Mibi02g0610 389 MobiDBLite consensus disorder prediction 65 146 - -
Mibi02g0610 389 Pfam Zinc finger, C3HC4 type (RING finger) 161 199 IPR018957 GO:0046872
Mibi02g0610 389 MobiDBLite consensus disorder prediction 1 32 - -
Mibi02g0610 389 MobiDBLite consensus disorder prediction 1 22 - -
Mibi02g0610 389 MobiDBLite consensus disorder prediction 302 330 - -
Mibi02g0610 389 PANTHER UNCHARACTERIZED 332 382 - -
Mibi02g0610 389 MobiDBLite consensus disorder prediction 127 146 - -
Mibi02g0610 389 ProSiteProfiles Zinc finger RING-type profile. 161 200 IPR001841 -
Mibi02g0610 389 SUPERFAMILY RING/U-box 153 224 - -
Mibi02g0610 389 MobiDBLite consensus disorder prediction 105 123 - -
Mibi02g0610 389 MobiDBLite consensus disorder prediction 75 99 - -
Mibi02g0610 389 ProSitePatterns Zinc finger RING-type signature. 176 185 IPR017907 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0610 153 251 C2H2 Transcription Factor Family AT5G39550 35.922 3.42e-06 47.4