Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0605 ATGATTATCACAGTCGAGCTACGGATGATGGTTAATCGTGAGACGTTTAGGTCGCTTGGACATGTGCCAACGGGATCATGTATTCATTCTATGTTCATGGAGGGTATAGAACCTGATATAAAAAGGCATCCACCAGAACATGATGTGGAAACTGAAGGTCAAGTATCTCCTGGAGCAGCAATTGATGTTGGACAACTGAGTCAAAGCCCTGAGGCTTCCTCAATTGCAGATGAGTGTACAAGCCCCAATATTGGTCCTGTTGACCCAAGTCGGAAGGGAAATAATGATGATTGCCGGAATTCAAACATTTCTTCTGATCACAATTTTCAGATCGTATCTGCGAAAGGAACTCTCTCTCAGAAATCAGACATTTCCGCTATTGATGTATCAAATATCAGTAGTGTCATAAAAGCTGAGGGGGAGCCATCCATGGTACCAAAAATCGGCATGGAGTTTGATTCAGAAGACCAAGCTTACAAGTGTTACAGCAGGTATGCTGTTTTGAAAGGTTTCAGCATAAGAAAAGATTTTGTCAACAAAAGTAGGGTGAATGGTGTAGTGGTGTCTAGAAGATACACTTGCTACAGACAGGGTTATCGGCCTGATAAATATAATGCCAATGTGAGGAAATCCCAGCCAGAAACTAGGACTGGATGCCTGGCATATATGACTATTGCTCGTCAGCCTAATGGCAAGTTTCGTGTCACTCATTTTGAAACAGAGCACAATCATGAGCTTGCAACACCCTGTACTGCTCATATGTTACCATCACAGAGAAGATTGAGTTTCGCTCAAGCAGTTGAATCTAACTTGTCTAATAATTCTGTGTTGGATGGGGTACCAAAACTTGGAATGGGATTTGATTCAGAAGATCATGCATATGAGTTTTATAATGCCTATGCTGGACGAGTAGGCTTCAGTGTTCGGAAAGATTATGTTAATAGAAGTAAAGTTGATGGTGCTGTGGCATCTAGAAGGTTCACATGCTTTCGAGAAGGTTTTCGGCAGAAAGACAAACGTGATATGAATGTGAAGAGGCCTCGAAAAGAGACTAGAATTGGATGTTTAGCACAACTGGCTATTTCTCGTCAGCCTGATGGTAGATATTGTGTAACTCATTTTGAAGAAAAGCATAATCATGAGCTTGTTGCTGCTTGTAGAGTTCATATGTTACGGTCGCAGAAGAGAATAGCCACGAACCAGGCCATTAAGAGCAACACGGTAGATGGTTCTAGGGTGCTTTCTGAGTCTGGATCTAATTGCAATGCTATTGAAGGTTTACATGATCGAGGTTGCTACCCCATAGAATACGGAAATAAATTGCCTTTCAAGCGCACAAGAGAAATGAAAGAGGGAGAAGTTGAAAAGCTAAAGCATCACTTTCAAAGCAAGCAATCAAAAAATCCTTCCTTCTTTTATGCTTTCCAACTTGATTCTGATGATCAAATAACTAATATGTTTTGGGCAGACACAAAGATGATAGGAGACTACTGTGACTTTGGTGATGTTGTTTGCTTTGATTGTAGTTACAGATTTTGTAGAGACTCTCGTCCATTCGCTCCATTTCTTGGTGTCAATAATCACAAGCAAATGACTATATTTGGGGCTGCACTTCTATACGATGAAACGATTGAATCTTTCAAGTGGCTATTTCAAGTTTTCTTGGAGGCAATGTCCAGAAGACAGCCAAAGACAATTCTTGTAGATCAAGATGATATAATAGCTGAAGCAGTTTCTTATGTCTTGCGTGAAACTAACTGCCAAATCTGTACATGGCATGTATACCAAAACACACTAAATCAACTCAGTCACATGTTTGTGGGATCTAATTCTTTTGTAAATGATTTGAGAAACTGCTTTTTTTATCATGAGGAGGAGGAAGACTTTGTTCATGCATGGAATGATTTTCTAAGCAGGTATAATCTTTGGGAGAATGAATGGTTGTGTCGAATATATGAAAGTAGAGACAACTGGGCCTTAGCATATGGAAGGCAAAATTTCAGTGCTGACATAACGAGTGTGCTGTGGAGGGAGAATCTTACTGGCAGTTTGAAGAAGCACCTAACGAAGGATACGGATGTGCTATCATTTCTCAAGTATCTTGGGAAGGTGGTGGCTGATTGGCACTATAAGGAATTAGAAGCCAATTATGATATGAGCCAGCGAATGCCAGCACTGATGGGAGATGTGATTCTCTTAAAGCATGCGAGAGATCCATACACACCAAGGATATTCGAGTTATTTCAGAAAGAATATGAAACTTGTTTAAACCTAGTGATAAAGCATTGCAGTGAGAGTGGATCATTGTACAGGTATAAAGTTAGCATATATGAACACTTACGAGAGTATACAGTTACCTTTGATTCATCTAATGAGACCGTAAGCTGCAGCTGTATGAAATTTGAGTCGATGGGAGTCTTATGCAGCCATGCACTTAAAGTTCTTGATTACAGGAATATAAGGATTCTTCCATCATTGTACATCTTAAAGAGGTGGACAAAAGATGCGAGACTTGATCTTTGGAGGCAAACTTAA 2535 0.4008 MIITVELRMMVNRETFRSLGHVPTGSCIHSMFMEGIEPDIKRHPPEHDVETEGQVSPGAAIDVGQLSQSPEASSIADECTSPNIGPVDPSRKGNNDDCRNSNISSDHNFQIVSAKGTLSQKSDISAIDVSNISSVIKAEGEPSMVPKIGMEFDSEDQAYKCYSRYAVLKGFSIRKDFVNKSRVNGVVVSRRYTCYRQGYRPDKYNANVRKSQPETRTGCLAYMTIARQPNGKFRVTHFETEHNHELATPCTAHMLPSQRRLSFAQAVESNLSNNSVLDGVPKLGMGFDSEDHAYEFYNAYAGRVGFSVRKDYVNRSKVDGAVASRRFTCFREGFRQKDKRDMNVKRPRKETRIGCLAQLAISRQPDGRYCVTHFEEKHNHELVAACRVHMLRSQKRIATNQAIKSNTVDGSRVLSESGSNCNAIEGLHDRGCYPIEYGNKLPFKRTREMKEGEVEKLKHHFQSKQSKNPSFFYAFQLDSDDQITNMFWADTKMIGDYCDFGDVVCFDCSYRFCRDSRPFAPFLGVNNHKQMTIFGAALLYDETIESFKWLFQVFLEAMSRRQPKTILVDQDDIIAEAVSYVLRETNCQICTWHVYQNTLNQLSHMFVGSNSFVNDLRNCFFYHEEEEDFVHAWNDFLSRYNLWENEWLCRIYESRDNWALAYGRQNFSADITSVLWRENLTGSLKKHLTKDTDVLSFLKYLGKVVADWHYKELEANYDMSQRMPALMGDVILLKHARDPYTPRIFELFQKEYETCLNLVIKHCSESGSLYRYKVSIYEHLREYTVTFDSSNETVSCSCMKFESMGVLCSHALKVLDYRNIRILPSLYILKRWTKDARLDLWRQT 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0605 844 SMART 26again6 794 821 IPR006564 GO:0008270
Mibi02g0605 844 ProSiteProfiles Zinc finger SWIM-type profile. 783 819 IPR007527 GO:0008270
Mibi02g0605 844 MobiDBLite consensus disorder prediction 66 80 - -
Mibi02g0605 844 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 131 265 IPR031052 GO:0006355
Mibi02g0605 844 Pfam MULE transposase domain 503 597 IPR018289 -
Mibi02g0605 844 Pfam SWIM zinc finger 783 818 IPR007527 GO:0008270
Mibi02g0605 844 MobiDBLite consensus disorder prediction 66 104 - -
Mibi02g0605 844 Pfam FAR1 DNA-binding domain 162 247 IPR004330 -
Mibi02g0605 844 Pfam FAR1 DNA-binding domain 295 383 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0605 Mibi-ChrMibi02 5927215 5930478 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mibi02g0605 MULE 2e-19 CL0219