Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0600 ATGTGTCACACCAATACCCCTCCCCCTCCTCCTTCTTCCTCCGATCTCACAAAATCAGATTCTCTTAATCCTCTTCCCACACCTCACCGTAAGAACAGAACAAAAACCAGGAAGCCCAAATTCCTTAGCCTTCGTCTCCAGCTTTCATCAAACCAATCCGATCCAATGACACATCATCAACAGCTCAATCTCTTCCCCTTACACCCAGAAAACTTGATCCATCATGACAAAGATATCATGCACGATGACCATAACATCGCCTTCCTCTTCACCTCCCATGGCCCGGCCACTCTCAACGGCCTTCTCCAACATGACTCCCCCACCACCACCTCCACCGTGTCGGAGGACGATTCTATGTCGCCGCCGTGTCTGACGGCGGACCCCTTCGACGGCGACGGCGGGAGATCGCTTGTACGGAAGGCTATGAAGAGGAGGAACGAGGAGGAAGAGGAGAGGTGGGTGTGTTACTCTGAGGTCACTAGCTATTCCAGCGCCGGCACGGCGGAGAGCGCCGCCGCTACGACGGCGTCGATTGGGTTGCTGTCGTTGAAGCTGGATTATGAGGGTATATTAAATGCTTGGTCTGATAAAGGTCCTCTTTATCTTCCTGGTGATAGTGATACCCCACAAGCTGTCCCTGATTTTCTTGATCATGTCCTTCCTCACCATCCGCCCCATGTAGAGAGTGAGAAGAAGGTTGGGCAAAGGGAGGCAAGCGTGTTAAGGTACAAAGAGAAGAGGCAAAGCAGGCTCTTCTCCAAGCGAATCCGGTACGAGGTTCGTAAGCTCAATGCTCAACAGAGACCCAGGATGAAGGATCAGATTTCTCTCTTTATTGTTTATGCAGGGACGATTTGTGAAGAGGGACTGAGAAATGAAGCCCCTGGGTGGCATGGCACTCACTCCTAA 909 0.5171 MCHTNTPPPPPSSSDLTKSDSLNPLPTPHRKNRTKTRKPKFLSLRLQLSSNQSDPMTHHQQLNLFPLHPENLIHHDKDIMHDDHNIAFLFTSHGPATLNGLLQHDSPTTTSTVSEDDSMSPPCLTADPFDGDGGRSLVRKAMKRRNEEEEERWVCYSEVTSYSSAGTAESAAATTASIGLLSLKLDYEGILNAWSDKGPLYLPGDSDTPQAVPDFLDHVLPHHPPHVESEKKVGQREASVLRYKEKRQSRLFSKRIRYEVRKLNAQQRPRMKDQISLFIVYAGTICEEGLRNEAPGWHGTHS 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0600 302 MobiDBLite consensus disorder prediction 107 131 - -
Mibi02g0600 302 MobiDBLite consensus disorder prediction 1 40 - -
Mibi02g0600 302 Pfam CCT motif 236 272 IPR010402 GO:0005515
Mibi02g0600 302 ProSiteProfiles CCT domain profile. 236 278 IPR010402 GO:0005515
Mibi02g0600 302 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 9 272 - -
Mibi02g0600 302 MobiDBLite consensus disorder prediction 15 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0600 Mibi-ChrMibi02 5886541 5887892 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0600 181 275 C2C2-CO-like Transcription Factor Family AT1G73870 42.727 4.10e-18 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mibi02g0600 CCT 2e-13 CL0281