Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0567 ATGTCGATGGAGTCACCTGTCAATGGAGCCGAGTGTACATCAGAGGCTCAGAATTCAGTTTCTGCACAAGATCATGACTCTCCTTCGACATCTGAAACTCCAAAATCTTCTTCTCGGCCACCCTTGAGAGCATCATCAAGAAATCTCATCGGTCAACCTAACTACGGAATTAAGATTCACCAAAAGAATTCTTACCAGGAAACCAACCATGTGCAGGATCAAGAACCACCAAATAAGGCCAAGCAACATCACAATTCAAGTGGAAAGTCAGGAGAAATTAGTTCAGAGAAGAATTATGGTGCAAATGGCATATCAGTATCAGTCCCATCATCTAAAGGAGTTGTTGATCAAACAAAGAGTTGCTCTCAGTCAGATGTAACGTTTTGTGCAAGTCCTCAGAATAGCTTCTATTCTGCAGCTACCTATTCAGAAGCCAAAGAAAGTTTCGCCAATACTGAAGCCAGTGAGTGTGTTGGTGTGGACAAGTCGGGCGAAAGTGGTGAAGCTACTAACTCTTGTGACTTCAACGAGAGTAGGAAGACCAGCATCTGTAGAGGGAGTACTGGGAGTGATGTGAGTGATGAGAGTAGCACAAGTAGTTTAAGCAGTGCTTTGTATAAACCTCACAAGGCTAATGATATTAGATGGGAAGCGATTCAAGCCGTGCGAACTCGTGATGGGGTGCTGGAGATGAGGCATTTCAGGTTGTTGAAGCAATTGGGATGTGGGGACATAGGAAGTGTGCATCTTGCAGAGTTGAGTGGCACGAGAACGTGTTTTGCGATGAAGATAATGAACAAAACGGAGCTGGCTAGTAGGAAGAAGCTTCTGAGGGCTCAGACAGAAAGAGAGATATTGCAGTCTCTAGATCATCCTTTTTTGCCCACATTATACACACATTTTGAGACAGAGACGTTCTCTTGCTTGGTAATGGAGTTTTGCCCTGGTGGGGACTTGCATGCGCTGAGGCAAAGACAGCCTAGGAAGTATTTCTCGGAGCATGCCGCCAGGTTTTATGTAGCAGAAGTTCTTCTTGCTTTGGAATACCTTCACATGCTTGGGATCATCTACAGAGACCTCAAACCAGAGAACGTGTTGGTGCGAGAAGACGGCCACATAATGCTCTCAGACTTCGACCTCTCTCTGCGTTGTGCCGTGAGTCCAACCCTCGTAAAATCCTCAAACTCAACCCTAGATGGAAGATCCTCAGGATACTGCATTCAACCAACGTGCATCGAACCAACCTGCGTAATTCAACCAGACTGTATCCAACCCTCCTGTTTCACACCTCGATTTCTAACAGGAAAATCCAAGAAAGACAAAAAAACCAAACCAAAGAACGAAACACCTCACCAGGTAACTCCTCTACCAGAACTCATAGCCGAGCCCACAAACGCGCGTTCCATGTCATTCGTAGGAACACACGAATACCTAGCGCCTGAGATCATCAAAGGAGAAGGTCACGGAAGTGCGGTGGATTGGTGGACGTTTGGGATATTCTTGTACGAACTTTTGTTTGGAAGAACGCCGTTTAAAGGATCGGCGAATAGGGCGACTTTGTTCAATGTGGTTGGGCAGCCATTGAGGTTTCCAGAATCGCCGACAGTGAGCTTCGCTGCTAGGGATTTGATAAGAGGATTGCTGGTGAAAGAACCTCAACATCGATTGGCTTATAGAAGAGGAGCCACGGAGATCAAACAGCATCCGTTCTTTCAGAATGTGAATTGGGCGTTGATACGTTGTGCAAATCCGCCGGAGATTCCGAGGATGGTGGCGCTGAAAGAGATGGCGGCGGCGGCGGCCAAAGTGCCCGGCGTTAAGTCTGCCGGTAACTATTTAGATATTGATTTCTTTTGA 1857 0.4642 MSMESPVNGAECTSEAQNSVSAQDHDSPSTSETPKSSSRPPLRASSRNLIGQPNYGIKIHQKNSYQETNHVQDQEPPNKAKQHHNSSGKSGEISSEKNYGANGISVSVPSSKGVVDQTKSCSQSDVTFCASPQNSFYSAATYSEAKESFANTEASECVGVDKSGESGEATNSCDFNESRKTSICRGSTGSDVSDESSTSSLSSALYKPHKANDIRWEAIQAVRTRDGVLEMRHFRLLKQLGCGDIGSVHLAELSGTRTCFAMKIMNKTELASRKKLLRAQTEREILQSLDHPFLPTLYTHFETETFSCLVMEFCPGGDLHALRQRQPRKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVKSSNSTLDGRSSGYCIQPTCIEPTCVIQPDCIQPSCFTPRFLTGKSKKDKKTKPKNETPHQVTPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQNVNWALIRCANPPEIPRMVALKEMAAAAAKVPGVKSAGNYLDIDFF 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0567 618 MobiDBLite consensus disorder prediction 180 199 - -
Mibi02g0567 618 PANTHER FLIPPASE KINASE 1-RELATED 65 593 - -
Mibi02g0567 618 MobiDBLite consensus disorder prediction 1 73 - -
Mibi02g0567 618 Gene3D Transferase(Phosphotransferase) domain 1 465 589 - -
Mibi02g0567 618 SMART serkin_6 234 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g0567 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 355 367 IPR008271 GO:0004672|GO:0006468
Mibi02g0567 618 MobiDBLite consensus disorder prediction 1 116 - -
Mibi02g0567 618 FunFam Serine/threonine-protein kinase D6PK-like 232 317 - -
Mibi02g0567 618 FunFam serine/threonine-protein kinase D6PK-like 318 385 - -
Mibi02g0567 618 Gene3D Phosphorylase Kinase; domain 1 232 317 - -
Mibi02g0567 618 Gene3D Transferase(Phosphotransferase) domain 1 318 385 - -
Mibi02g0567 618 Pfam Protein kinase domain 468 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g0567 618 Pfam Protein kinase domain 235 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g0567 618 ProSiteProfiles Protein kinase domain profile. 234 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g0567 618 FunFam serine/threonine-protein kinase D6PK-like 466 589 - -
Mibi02g0567 618 SUPERFAMILY Protein kinase-like (PK-like) 211 590 IPR011009 -
Mibi02g0567 618 MobiDBLite consensus disorder prediction 87 116 - -
Mibi02g0567 618 CDD STKc_phototropin_like 232 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0567 Mibi-ChrMibi02 5564297 5566932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0567 142 618 AGC Kinase Gene Family AT5G47750 71.951 0.0 715
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mibi02g0567 Pkinase 6.9e-37 CL0016