Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0565 ATGGAATCACCCATTAACGACCATGCCGTTGACGGAGAAACCAACGATGCTCGGTCTTTAGGCCACAGAGAAGAGGAGGATGACAAGTCTCAGCCTCTTACTGGCGATGGGGCAAGTCCCGGAAAGATATTTATAGGTGGTTTAGCGAGAGAAACGACAATTGCTCAATTTGTCAAGCATTTTGGTAAGTATGGTGAGATTACCGACTCTGTAATAATGAAGGACAGGAAGACTGGCCAACCGCGTGGATTTGGTTTTATAACGTATGCAGATCCCTCTGTGGTTGATAAGGTCATGGAGGATACTCATGTCATTAATGGCAAACAAGTGGAAATTAAACGTACAATACCAAGAGGCGCTGTTGGCTCTAAGGATTTCAGGACGAAAAAAATTTTTGTGGGTGGAATTCCCTCAACCGTGACTGAAGATGAGTTTAAAGACTTCTTTACTCACTATGGAGAGGTGAAAGATCACCAAATAATGCGAGATCATTCTACAAATCGTTCTCGTGGCTTTGGGTTTATTACTTTTGAGACTGAGGATGCTGTTGAGGATCTTTTGGCTAAGGGAAACAAAATAGATTTTGCTGGGGCTCAGGTTGAGATAAAAAAGGCCGAGCCAAAGAAACCAAACCCACCACCAGCCTCCTCCAAGCGCTATAATGACTCGAGATCTTCATTTGGCAGTGGTTATGGTGATGCTTATGATGGCTTTGGTGGTGGCTTTGGTGTTGGGGGATATAGGTCAGGTGGTGTTTATGGTGGTAGGGGCGGCCCCTATGGTGGATATGGTGGTGAATTTGGCGGGTATGGAGGATATGCTGGGGCCATGGGACCTTACAGAGGAGATCCCTCCCTCGGGTACTCTAGTCGATATGGAGGTGGGTTTAGCCGAGGTTATGACCTTGGAGGATATGGTGGACCTGGTGAGAGTTATGGGGGATATGGTGGTGGAGTTGGTTCTTCAGGCGGTGCCTATGGAAGTGGGTATGATGCCAGCTTGGGGGGTGGATATGGCGGAAGTGGCAGCAGTGGTGTCGGGGGTTCTTTTTATGGGAGTAGAGGTGGGTATGGTGGTGCAGGGTCTGGTCGATATCATCCTTATGGACGATAG 1113 0.4771 MESPINDHAVDGETNDARSLGHREEEDDKSQPLTGDGASPGKIFIGGLARETTIAQFVKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDKVMEDTHVINGKQVEIKRTIPRGAVGSKDFRTKKIFVGGIPSTVTEDEFKDFFTHYGEVKDHQIMRDHSTNRSRGFGFITFETEDAVEDLLAKGNKIDFAGAQVEIKKAEPKKPNPPPASSKRYNDSRSSFGSGYGDAYDGFGGGFGVGGYRSGGVYGGRGGPYGGYGGEFGGYGGYAGAMGPYRGDPSLGYSSRYGGGFSRGYDLGGYGGPGESYGGYGGGVGSSGGAYGSGYDASLGGGYGGSGSSGVGGSFYGSRGGYGGAGSGRYHPYGR 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0565 370 Gene3D - 41 120 IPR012677 -
Mibi02g0565 370 SUPERFAMILY RNA-binding domain, RBD 127 237 IPR035979 GO:0003676
Mibi02g0565 370 MobiDBLite consensus disorder prediction 1 40 - -
Mibi02g0565 370 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 43 110 IPR000504 GO:0003723
Mibi02g0565 370 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 131 199 IPR000504 GO:0003723
Mibi02g0565 370 FunFam Heterogeneous nuclear ribonucleoprotein 1 40 121 - -
Mibi02g0565 370 SUPERFAMILY RNA-binding domain, RBD 38 119 IPR035979 GO:0003676
Mibi02g0565 370 Gene3D - 122 237 IPR012677 -
Mibi02g0565 370 MobiDBLite consensus disorder prediction 1 32 - -
Mibi02g0565 370 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 22 370 - -
Mibi02g0565 370 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 41 117 IPR000504 GO:0003723
Mibi02g0565 370 SMART rrm1_1 42 113 IPR000504 GO:0003723
Mibi02g0565 370 SMART rrm1_1 130 203 IPR000504 GO:0003723
Mibi02g0565 370 FunFam Heterogeneous nuclear ribonucleoprotein 1 122 242 - -
Mibi02g0565 370 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 129 207 IPR000504 GO:0003723
Mibi02g0565 370 MobiDBLite consensus disorder prediction 201 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0565 Mibi-ChrMibi02 5543549 5546980 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0565 41 195 Eukaryotic Initiation Factors Gene Family AT1G71770 26.667 3.69e-10 59.7