Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0562 ATGAGCAGTGGCAAGAGTGATGAGGCGAATAAGTGTGATAAGTACGACAACATTGATTCTGGGTTTATTCCGCCTGGCGGTAGCTGGTGGAACTTGCCTGAACATAAGCAAGAAGATGTTGAAGTCGCAAAACCATTGACGGTGATGCTCGCTCTTCGCCGATTGTGGATTTTAATTTCCGGCGAGAGATGGATTTTACTTGTGGCTTTTGTTTCCCTTATCATAGCTGCTGTTTCGGAGATCTCCATGCCAAGTATACTGGCTGCGTCAATATTTTCAGCACAGAGTGGTGAGATCGTGGCCTTCCAGAGGAAGGCACAGTTTTTGCTTGTTCTGTGTTTCACTTCAGGCATTTGCAGTGGTTTACGAAGCGGCTGCTTTGGAATTTTGAATGTAATCCTGTTACAGCGTCTACGGGAAAATGTGTATGCTGCTCTTCTTTTTCAGGACATATCTTATTTTGATAGAGAGCAAGTTGGTCACTTAACAAGCAGGCTTTCAGCAGATTGTCAACGACTATCTTTTGTCATAGGAAATGATCTTCAATTGATACTTCGCAACACTTTGCAGGGAACAGGTGCAATAATTAATCTACTGACTTTATCATGGCCTCTGGCATTGTCTGCCTTGGTCATTTGCTCTGTTTTATCTTCAATTTTCCTGGTATATGGCCAGTATCAAAGAACAGCAGCCAAGTTGACCCAAGATTTCACAGCTGGTGCCAATGAAGTAGCACAGGAAACCTTTTCACTGGTAAGAACAGTCCGAGCCTATGGCACTGAAGTAGAAGAAATTGGAAGGTACAAGCTATGGCTTCAAAGATTAGCATTAGTAAACACTCGAGAGAGTTTGGCTTATGGTTTATGGAATCTGAGTTTCAACACCCTTTATCGTTCAACTCAGGTATTTGCTATACTGTTAGGAGGGATGTCTGTTCTCTGTTGTTGTGTACCTACGGAGCAGCTTACGAAGTATGTGCTATACTGTGAATGGCTGATTTTTGCTACTTGGAGGGTGACAAATAGCTTGTCATCATTCCTGCAGTCCATTGGAGCTAGTGAAAAAGTTCTTCAAATGATGGATCTTTTGCCCAGTGACCAATTTTTATCGAAAGGAGTGAAGTTGCAGAGGTTAAGGGGACGTATTGAGTTTGTAAATGTATCATTTCATTATCCTGCAAGGATCATGGTGCCTATTCTAGAACACTTAAACTTTTGTGTAGAACCAAATGAGGTTATTGCAATAGTTGGTCTTAGTGGTAGCGGAAAGAGCACATTACTCAGCCTTTTACTTCGTTTATATGAGCCGAGTAATGGTCAGATTTACATTGATGGGTTCCCTCTCGAAAAATTGGACATCAGGTGGCTGAGACAAAATATTGGATATATAGCTCAGGAACCTCATCTATTTCACATGGACATCAAGTCAAACATAAAATATGGTTGCCCTGGAGACATTAAACATGAGGATATTGAACGAGCAGCAAAGAAGGCCTATGCTCATGACTTCATTTCATTTTTTCCAAACGGCTATGAAACCATAGTTGATGATAACTCACTCAGGGGAGGACAAAAGCAACGAATTGCCATTGCTAGGGCCATTCTTAGGGACCCCGTTATTATGATACTTGATGAAGCAACCAGTGCTCTAGATTCTGAGAGTGAGCATTATATCAAGGAGGTTGTATACTCATTAAGAGGTGGAACTAAAGCAAGAACCATCATTATCATAGAGCATAGGCTTTCTACCCTTAAAGCTGCTGACAGGATCTTTGTAATGGATGATGGTCGCATCATAGAGGTGGGTAACCACGAAGAACTTCTGCATAAAGATGGGTTCTATGCAAAATTGTATAATGTTCAAACAGATACTTTGACTTGA 1881 0.4141 MSSGKSDEANKCDKYDNIDSGFIPPGGSWWNLPEHKQEDVEVAKPLTVMLALRRLWILISGERWILLVAFVSLIIAAVSEISMPSILAASIFSAQSGEIVAFQRKAQFLLVLCFTSGICSGLRSGCFGILNVILLQRLRENVYAALLFQDISYFDREQVGHLTSRLSADCQRLSFVIGNDLQLILRNTLQGTGAIINLLTLSWPLALSALVICSVLSSIFLVYGQYQRTAAKLTQDFTAGANEVAQETFSLVRTVRAYGTEVEEIGRYKLWLQRLALVNTRESLAYGLWNLSFNTLYRSTQVFAILLGGMSVLCCCVPTEQLTKYVLYCEWLIFATWRVTNSLSSFLQSIGASEKVLQMMDLLPSDQFLSKGVKLQRLRGRIEFVNVSFHYPARIMVPILEHLNFCVEPNEVIAIVGLSGSGKSTLLSLLLRLYEPSNGQIYIDGFPLEKLDIRWLRQNIGYIAQEPHLFHMDIKSNIKYGCPGDIKHEDIERAAKKAYAHDFISFFPNGYETIVDDNSLRGGQKQRIAIARAILRDPVIMILDEATSALDSESEHYIKEVVYSLRGGTKARTIIIIEHRLSTLKAADRIFVMDDGRIIEVGNHEELLHKDGFYAKLYNVQTDTLT 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0562 626 SUPERFAMILY ABC transporter transmembrane region 53 366 IPR036640 GO:0005524|GO:0016020
Mibi02g0562 626 Gene3D ABC transporter type 1, transmembrane domain 48 366 IPR036640 GO:0005524|GO:0016020
Mibi02g0562 626 PANTHER ABC TRANSPORTER B FAMILY 46 620 - -
Mibi02g0562 626 SMART AAA_5 409 597 IPR003593 -
Mibi02g0562 626 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 373 621 IPR027417 -
Mibi02g0562 626 CDD ABC_6TM_TAP 69 356 - -
Mibi02g0562 626 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 67 313 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi02g0562 626 Gene3D - 372 625 IPR027417 -
Mibi02g0562 626 FunFam Multidrug ABC transporter ATP-binding protein 374 625 - -
Mibi02g0562 626 Pfam ABC transporter transmembrane region 66 310 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi02g0562 626 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 382 620 IPR003439 GO:0005524
Mibi02g0562 626 Pfam ABC transporter 400 548 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0562 Mibi-ChrMibi02 5516275 5524235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0562 108 626 Calmodulin-binding Proteins AT2G36910 31.769 2.58e-70 246