Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0548 ATGAATACGACGCCGTTCATGGACAAGCAGATTATGGATCTATCCCAAGGATCGTCTCCGAGCAAGGATTTCATCGACCTGATGAGCCATCCTAAGGAGGAAGAAGGTGCAGACGCAGAAGGTGAAGCTCGCCGTGGCAGCCACCACCAAATCGGTGGCAATGGGATTAAGGAGGATATCGTTCCCAGTTACGATTTCCAGCCGATTCGCCCACTCGGAGCTTCGACTCAGTCTTCCAATCACGATTCCAACCCTAATTTGGGAGGGATTTCGAGGTCTTGGAATTCTGACTCCAAGAGCTTTTCCACCCCAATCCTTAGAAATTATAATTCTCTGGACTCTCTTGAACCTGCAAAAGTCACAGTAGAAAAGGATCGAAATGCTTTTGATGCTGCAATATTGTCTGAGATAGATCAAACCATGAAGAAGCATATGGAGAATTTGCTTCATGTTCTGGAAGGCATCAGTGCAAGGCTAACGCAACTAGAAAGCAGAACTAACCATCTTGAAAATTCTGTGGATGAGTTGAAGGTGTCTGTTGGAAACAATCATGGGAGCACTGATGGAAAAATGAGACAGCTCGAGAATATCCTTAGAGAGGTGCAAATGGGTGTACAAGTTTTAAAGGACAAGCAAGATGTGGTGGAAGCTCAATTGCAGATGGCAAAGCTTCAAGTGTCCAAGGTGGACCAACAATCAGAAACTCAGGCTAGTGTGATTACAGATCCTGCCCAGCAAACTGCGTCAGCTCCTCAGCAATCACAACAACAGCTTCCTTCCCCTGTTAATCTTCCACAATCAGTTGCTGCGGTGCCTCACCCTAATGCTCCTCCTCAGCCTCTGCCCCAACATGTTTTGCCAACTCCAGCTCAACTTCCCAATCAATTTCCTCAGAACCAAATTCCTTCTGTTCCTCAGCGAGAACAATATTTCCAACCACCACCTCAATCCCAGGAAACTGCAAATCAGCAATACCAATTGCCTTTATCTCAGCAGCCTCATCCTCCTCCTGGGGCACCTCCACAGCAACAATATCAACAGAACCCTCAACCTCAGTACCCTAAGTCCGCACCTCATCCACCTTTACAACAGTCATCACCTTCTCCTGTCATTCCCCCACCTCAACTGCCATCTTCAATGGGTCACCATGTGGAGGATACATCGTATATCCCTCCTCAGAATTATCCACCCAGTGTCCGCCAACCACCGTCGCAGCCACTACCCAGCGGGCCACCTCCTTCCCAGCAATTCTATGGACCGCCATCCCATGCCTTTGAGCCACTATCTAGTAGATCTGGTTCAGGTTTTTCCTCTGGATATAGTGCACCGTCTCTACCTGCTGAGCCATATCATTATAGTGGATTGCCTCAGTATGGCGGCACTTCAGGACCAAAACCACAGCTTCCTCCTTCTGCAGTGGCTCCTCCAAGTGGTGGAAGTGGGTACCCACAACTTCCAACTGCTCGTGTGCTGCCCCATGCAATGCCTACAGCTTCAGGGGCAAGTAGCAGTTCCGGATCTGGTGGAAGCGGAAGTCGAGTTCCCTTAGATGATGTGGTTGACAAAGTGGCAAGCATGGGATTCCCTAGAGACCATGTGAGGGCAACAGTTCGGAGGCTAACAGAGAATGGTCAAGCAGTTGACCTCAATGTAGTGTTGGATAAGCTTATGAACGAAAGTGATATCCAGCCAGGAGCTGGAGCAGGAGCTTGGTATGGTCGGTAG 1725 0.4887 MNTTPFMDKQIMDLSQGSSPSKDFIDLMSHPKEEEGADAEGEARRGSHHQIGGNGIKEDIVPSYDFQPIRPLGASTQSSNHDSNPNLGGISRSWNSDSKSFSTPILRNYNSLDSLEPAKVTVEKDRNAFDAAILSEIDQTMKKHMENLLHVLEGISARLTQLESRTNHLENSVDELKVSVGNNHGSTDGKMRQLENILREVQMGVQVLKDKQDVVEAQLQMAKLQVSKVDQQSETQASVITDPAQQTASAPQQSQQQLPSPVNLPQSVAAVPHPNAPPQPLPQHVLPTPAQLPNQFPQNQIPSVPQREQYFQPPPQSQETANQQYQLPLSQQPHPPPGAPPQQQYQQNPQPQYPKSAPHPPLQQSSPSPVIPPPQLPSSMGHHVEDTSYIPPQNYPPSVRQPPSQPLPSGPPPSQQFYGPPSHAFEPLSSRSGSGFSSGYSAPSLPAEPYHYSGLPQYGGTSGPKPQLPPSAVAPPSGGSGYPQLPTARVLPHAMPTASGASSSSGSGGSGSRVPLDDVVDKVASMGFPRDHVRATVRRLTENGQAVDLNVVLDKLMNESDIQPGAGAGAWYGR 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0548 574 Coils Coil 191 211 - -
Mibi02g0548 574 MobiDBLite consensus disorder prediction 330 344 - -
Mibi02g0548 574 Pfam UBA-like domain (DUF1421) 517 560 IPR010820 -
Mibi02g0548 574 MobiDBLite consensus disorder prediction 1 94 - -
Mibi02g0548 574 MobiDBLite consensus disorder prediction 1 23 - -
Mibi02g0548 574 MobiDBLite consensus disorder prediction 353 376 - -
Mibi02g0548 574 Coils Coil 145 179 - -
Mibi02g0548 574 MobiDBLite consensus disorder prediction 427 441 - -
Mibi02g0548 574 MobiDBLite consensus disorder prediction 271 287 - -
Mibi02g0548 574 MobiDBLite consensus disorder prediction 395 418 - -
Mibi02g0548 574 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 563 - -
Mibi02g0548 574 MobiDBLite consensus disorder prediction 26 47 - -
Mibi02g0548 574 MobiDBLite consensus disorder prediction 497 511 - -
Mibi02g0548 574 MobiDBLite consensus disorder prediction 70 94 - -
Mibi02g0548 574 PRINTS Proline rich extensin signature 354 370 - -
Mibi02g0548 574 PRINTS Proline rich extensin signature 277 293 - -
Mibi02g0548 574 PRINTS Proline rich extensin signature 392 417 - -
Mibi02g0548 574 PRINTS Proline rich extensin signature 331 352 - -
Mibi02g0548 574 MobiDBLite consensus disorder prediction 235 301 - -
Mibi02g0548 574 MobiDBLite consensus disorder prediction 235 264 - -
Mibi02g0548 574 MobiDBLite consensus disorder prediction 328 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0548 Mibi-ChrMibi02 5347406 5351466 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0548 6 311 Trihelix Transcription Factor Family AT5G14540 47.239 7.96e-70 233