LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi02g0538	ATGCAACCCCCTCACTCCTCCGCAAACCCCGCCGGAGACGATGACAGAGCCACCGTGTTCCGCCCTCTGTCACTGGCCCCACCTCACATGCTTGCCTTCCACCTTGCATGGCTCAACCTCTTCTCTTGCTTCTTCTCCACCTTCTCCATCCCTCCCCTCCTCCCCGCCATCCGCCACCACCTCCGCCTCACCCCCACCGACGTCGCCCACGCCGGCGTCGCCTCCTTCGCCGGCTCCATCGTCTCCCGCCTCCTGATGGGCCCCACCTGCCACCTCCTGGGCCCACGCATAGCCTCCGGCACCCTCTCCCTCCTCACATCACCTCTCATCCTCTCAACAGCTTTCATCTCCACACCTCAATCCTTCATCATCATTCGCTTCCTCGTTGGTTTTTCTCTCGCCAACTTTGTCTCCAACCAGTTCTGGATGAGCTCCATGTTCTCCCCTTCCATTGTGGGCCTGGCTAATGGAGTTGCTGCCGGGTGGGCCAACGTGGGCTCCGGTGTGACCCAGCTAGTTATGCCTCTTATTTACTCTCTCATCATCAACTTCAACGTCCCATCTTCCATTGCTTGGAGGCTTGCTTTTGTTGTTCCTGCGGTTTTCCAAGCAATTACGGGAATACTGGTGTTAGCTTTTGGGCAAGACCTTCCTTCTGGGAGATACGTGCGTGCCAAGACACAGAAGGGTGAAGGAGAGAATGTGTTCAAAATTGTATTTGAGGGGATGTGTAATTATAGAGGCTGGGTTTTGGGTCTGCTTTATGGGTTTTCTTTCGGGGTGGAATTAACTATGGACAATATAATAGCAGAGTACTTTTATGATAGGTTTGATGTGAATATGGAAGTTGCAGGGAGTATAGCTGCGAGTTTCGGGATGGCGAATTTGTTCTCACGGCCAATGGGAGGAGTGATTTCTGATGGTTTGGGAAGGAGATTTGATGTGAGAGGCAGATTGTGGGGTGTGTGGATGGTTCAAACGGTGGCTGGACTTCTTTGTGTGTTGCTTGGACGGCTCAACTCTCTCTGGAGTTCTATCCTTGTCATGTGTGCTTTCTCAGTATTTGTTCAGGCAGCTTCTGGCCTCATATTTGGTGTTGTCCCTTTCGTTTCCAAGAGATCGCTTGGAGTAATTTCAGGGATGACGGGGTGTGGAGGGACTATTGGGGCTGTGGTGACTCAAACGCTGTTGTTCTCAGGGACCCACTTGTCAAAGCAAACAAGCATATCTCTGATGGGCATTATGGTGGTATTGTGCACTCTTCCAGTGAGCTTTTTGTATTTCCCTCAATGGGGAGGTATGTTCTGCGGCCCTTCATCAGATCCCGATTCACCCGAAGACAATTATCGCCTGCTTGATTAA	1362	0.5198	MQPPHSSANPAGDDDRATVFRPLSLAPPHMLAFHLAWLNLFSCFFSTFSIPPLLPAIRHHLRLTPTDVAHAGVASFAGSIVSRLLMGPTCHLLGPRIASGTLSLLTSPLILSTAFISTPQSFIIIRFLVGFSLANFVSNQFWMSSMFSPSIVGLANGVAAGWANVGSGVTQLVMPLIYSLIINFNVPSSIAWRLAFVVPAVFQAITGILVLAFGQDLPSGRYVRAKTQKGEGENVFKIVFEGMCNYRGWVLGLLYGFSFGVELTMDNIIAEYFYDRFDVNMEVAGSIAASFGMANLFSRPMGGVISDGLGRRFDVRGRLWGVWMVQTVAGLLCVLLGRLNSLWSSILVMCAFSVFVQAASGLIFGVVPFVSKRSLGVISGMTGCGGTIGAVVTQTLLFSGTHLSKQTSISLMGIMVVLCTLPVSFLYFPQWGGMFCGPSSDPDSPEDNYRLLD	453

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi02g0538	453	ProSitePatterns	Sugar transport proteins signature 1.	302	317	IPR005829	GO:0016020\|GO:0022857\|GO:0055085
	Mibi02g0538	453	CDD	MFS_NRT2_like	33	425	IPR044772	GO:0015112
	Mibi02g0538	453	Pfam	Major Facilitator Superfamily	37	391	IPR011701	GO:0022857\|GO:0055085
	Mibi02g0538	453	Gene3D	MFS general substrate transporter like domains	29	222	IPR036259	-
	Mibi02g0538	453	ProSiteProfiles	Major facilitator superfamily (MFS) profile.	32	431	IPR020846	GO:0022857
	Mibi02g0538	453	SUPERFAMILY	MFS general substrate transporter	13	427	IPR036259	-
	Mibi02g0538	453	FunFam	Nitrate transporter 2.1	233	433	-	-
	Mibi02g0538	453	FunFam	Probable high-affinity nitrate transporter 2.4	25	220	-	-
	Mibi02g0538	453	PANTHER	HIGH-AFFINITY NITRATE TRANSPORTER 2.3	9	442	IPR044772	GO:0015112
	Mibi02g0538	453	Gene3D	MFS general substrate transporter like domains	234	431	IPR036259	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi02g0538	Mibi-ChrMibi02	5292418	5294504	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi02g0538	2	438	Inorganic Solute Cotransporters	AT5G14570	62.472	0.0	567