Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0535 ATGGCTTACGTGAGAAGCAGGGCCAACCCACTCCTCACCACCACCCTCCCTTACTTCCTTACATGGCGAACCTTTGGTTTCCGCACTGTTTGCTCTGGACGCCTCGGTTTTTCAACTCAATCCCAGCTCGATCATGACCCTCCCGTTGCTGCAACCAAGGTCCTGGAAGTCTTTAAAGAGGAATTTGAAATAGGATCGCGGTTGATTACGCTTGAAACTGGCAAGATTGCTCGATTCGCCAATGGTGCTGCTGTCTTGGGTATGGGTGAGACCAAGGTTTTGTCAACAGTTACCTCCGCTAAAGGAGATGCTGGTCGTGATTTCTTACCCCTCACTGTTGATTATCAAGAAAAGCAGTTTGCCCAAGGCTTGATTCCAGGTACATACATGCGGAGGGAAGGTGCCCCAAAGGAACGCGAACTTTTGTGTGGTCGCATTATTGACAGACCAATTCGACCATTATTTCCTGCTGGATTTTATCACGAGGTTCAGGTAATGGCAAGTGTTCTTTCTTCTGATGGAAATCAAGATCCCGATGTACTGGCAGCTAATGCTTCATCTGCTGCTCTTATGTTGTCAGATATCCCTTGGGGCGGCCCCATAGGAGTGGTTCGTATTGGGAGAATAGGCGGGCAATTTGTTGTAAATCCAACCATGGACGAGCTAAATTTTAGTGATCTGAATTTGGTGTATGCCTGCACAAGGGACAAAACTTTGATGATTGATGTGCAAGCTCGTGAGATATCTGAGAAAGATCTAGAAGCTGGATTAAGGCTGGCTCATCCTGAGGCAGTTAAATATATTGAGCCTCAAATCAGACTTGCTGCTAAGGCCGGTAAATCTAAGAAGGAGTACAGATTGTCTATGCTTTCAGACAGTACACTGGAGAAAGTCAGAAACTTGGCTGAAGCCCCTATTGAATCTGTTTTCACTGATCCTAATTATGGAAAGTTTGAACGTGGGGAGGCACTGGATAAGATCACACAAGATGTACGAAGAGTCCTTGAAGAAGAATGCGATGAAGAAAGCTTAAAAGTTTTGTCAAAGGCGGTGGACACAGTGAGGAAGAAGGTTGTTCGAAAAAGAATTATTGCAGAAGGATTTAGAGTTGATGGGCGACAGCTTGATGAAGTTAGGCCTTTGTATTGTGAAGCCGGAAATTTACCCATTTTGCATGGATCTGCACTTTTCTCTCGTGGAGACACGCAGGTCCTTTGCACAGTAACTCTTGGAGCACCTTCAGATGCTCAACGCTTGGATTCTTTAGTGGGCCCTCCAACAAAGCGATTTATGCTTCATTACAGTTTTCCACCCTTCTGTACAAATGAAGTTGGTAAACGTACTGGATTGAACAGGCGTGAAGTTGGACATGGAACTCTTGCTGAGAAAGCTCTTCTTGCTGTATTACCCCCTGAAGATGATTTTCCATATACTGTTAGAGTCAACTCAGAAGTCATGGCTTCGGATGGTTCAACATCAATGGCAACAGTCTGTGGAGGTAGTATGGCCCTTATGGATGCTGGCATTCCAGTTCGTGAACATGTTGCTGGTGTTTCTGTGGGTCTTGTTACTGAGTTTGATCCAATCAGTGGCGAAATAACAGATTATCGTATATTGACTGATATTTTGGGCTTGGAAGATCATTTGGGTGATATAGACTTCAAGATTGCTGGAACTCGAAAAGGGGTTACTGCTATTCAGTTGGATATAAAACCTGCTGGAATTCCTCTAGATATCATATGTGAATGTTTGGAACCTGCCCGTAAGGCTCGTTTTCAGATCATTGACCACATGAATCAGGAGATTAATGCACCTCACACTCAGACTGATAGAAACTCTCCACGGCTAGCTACCTTAAAATACAGCAATGATGCTCTTCGCAACTTGATTGGGCCACTGGGTGCTGTTAAGAGCAAAATTGAAGAGGAAACAGGTGCACGGATGTCTGTAGGTGATGGAACACTCACAATAATTGCTAAGAATCAATCCGTAATGGATAAAGTTCTGGAAAAGATTGATTTATTAGTTGGTCGTGAGATTGAAGTTGGAGGCATCTACAAAGGTGTTGTGACCTCGATCAAAGAATATGGGGCATTTGTGGAGTTCAATGGTGGGCAGCAGGGCCTTCTCCATATTTCTGAGTTGTCACATAAGCCGGTTTCACGGATTTCAGATGTGATATCTGTTGGCCAGCAGCTTTCTTTGATGTGCATAGGCCAGGATGTTCGTGGCAACATTAAATTATCCCTCAAAGCAACTCTGCCTCGTCCTGAAGGAATGGAATCTAACAACGCGGCTGAAGAGTCCATCCTGGACACAAAAGATACACGCAACATTTGGGCCCCAGTTGGGAATGAGTATTCTACCCAAGAAGAATTGGGCGCCAGCAAACCTGAGGTGGGTGAGACAAAACCATCAATTTTAATACGAAGTGCTGCAGAGTGTGATGAGGAGGAAAAGTCTTTGAATCAGTCTTCAAAGAGGAACCTCAAATCTGGTAATGGGTCTCAGTTAAGCCGCAAGTCAAAATCTCTTCGGCCTAATGATCCAGTTCATTCTACGCCAAGAACATCATCTCATCTGGCTCAGCATGTGATTGATTCTCTGTCATCTCTTTCCATTCCCTTTCCCCATGAGAAATCTAAGAAGTCCAAACCATCTGTGCTGAATGAAGCTGAAGATAAGGCTGCAACACCGAAAGCCATGAAGCTTGGAACAGAAGTCACTGCTAAAGTTGATCAAATTCGTGCACATGGTCTGGTTTTGGATTTGGGGGGAGGACTCCGAGGAATGTATAGGTTTGAGAAAGATGGTAAAAGGGACTACGAGATAGGTGACGAGCTACAGGTTGTGTGCTCTGGTTTTTCTAGCAGGGGAATTCCAGTGATGTCTTTGTCTCCTACTCGTGTTCCTCTCTTTTCTTGTTATTTATTGGTGGCTGTGGGAAGGGCTGTCATGGAGAAATGTGAAAAGAATATTTCCCCCATGGGCGCATCGTGGCAAGCTTTTTCCCTTGGCTATTTTGTCAACGGATGTGTATGTAGCATAACAGCATTGGGCAGCCCTGAGTACCCCACCGACCAAAGCAAAGATGATGGAAAGCGAAGGCCAAACAATTCCAAAAAGATCAAACTTGGCACTCACCAGTCACCAACACCACCTTCCCTCCATAAAAACAAAAACCAGACCCCTCTTTCTCTCTCTCCCTCCCTCACCGCCATGAGACCTTCTTCCTCATCCTCATGCCTTCTCTTCTCTCTCCTCTTTCTCTCCCTCCCTCCCTCCCTCCTCTCTGATCCTCGAATCTCCCAAGCGGGGCTCCTGTGCGGCGCCTCCAAGGCCCCCCTCTCTTCCAACTACATCCCAATGTTCGTCCAAGAGATGCAGTCTCTCTCCCAAACCATCACATCCACTTCACACAAGTGGGCCTCCCACTCTCTCAACCTCTCTTCCCACCACATCCACATCCCCATCTTCGCCCTCGCTCACTGCTTCCACGACCTCTCCCACACCGACTGCCTCCTCTGCTACTCCGCCAGCCGTACTAAGCTCCCTCGCTGCCTCCCCTCTCTCTCCGCCCGAATCTACCTCGACGGCTGCTTCCTTCGCTACGATCGCTTCCATTTCTACTCCCAACCCATCGACCCTCTCACCGATACTCTCAACTGTTCCTCCGCTTATGGTGTCGTGCCCGATGAAGGCGGTGAGAGGCGGCGATTTCAGACGAATGTCGGCGATGTGGTTGATCATGTGGTTAGGGTTTCTGTTGGGAATGGGTTAGGGTTTGGTGTGGCAGAGATTGGGGGTGTTTTTGCTTTGGCTCAGTGTTGGAGCACATTGCGGAGTGAGGATTGTGGGATTTGCTTGAGGAAAGCGGCCAGGGAGGTGAGGCGGTGCTTGCCTAATAGGGAAGGGAGGGCGTTGAATGCTGGTTGCTATCTGAGGTACTCCACTCATAAGTTCTACAATGAAGCCGGTGAGGGAGGAAAGGATCACAAGGGGTCATTTAGGAGGGGGGCCGGGGCCATCATAGCTATAGTGTTATCCGTGGCTGCAGTTATGGTGCTGTTTCTATCCGCCTTGTATGTTGTCCTCTCAAGATTATCAAAGACGAATAAAGGAAGCAATCGTCTTGGTCAGATTTCCATCTCCATAAACAAGTCGAGTTTGAACTTCAAATACGAGACTCTGGAGAAGGCCACGGATTATTTCAACTCTTCAAGAAAAATTGGGCAAGGAGGGGCTGGCTCTGTCTTCAAAGGGACTCTCCCAAATGGCAGAGTCGTGGCCGTCAAGAGATTAGTGTATAATACCAGGCAATGGGTTGATGAGTTCTTTAACGAAGTTAATTTAATTAGCGGAATCGATCACAAGAACCTCGTCAAACTCTTGGGCTGTAGCATCGAAGGCCCCGAGAGCCTCCTTGTTTATGAATATCTACCCAATAAGAGCTTGGATCAATTCATTTTTGAAAAGAACAAAAGTCAGATTCTAAATTGGAAGCAGCGTTTTGATATAATAATGGGAACAGCAGAGGGGCTTGCGTATCTCCATGCAGGATCCAAGACAAGAATAATCCATAGAGACATCAAAAGTAGCAACATTCTTCTGGACGAGAATCTCACTCCTAAGATTGCAGACTTTGGCCTGGCCCGCTGTTTTGGCGCCGACCAAACGCATCTCAGCACCGGAATCGCCGGAACACTAGGATACATGGCACCCGAATATCTTGTTCGAGGCCAACTAACGGAGAAAGCTGATGTTTATAGCTTTGGAGTGCTTGTTCTGGAAATCCTATGTGGGAGAAGGAACAATGTCTTCAGAGAAGATTCTGGCTCCCTTCTACAAATAACTTGGAAGCTCTATCGAACAAACCGATTGCACGAAGCTGTGGATCCATGCTTAGGAGATGATTTTCCAGAAGAAGAGCTATCAAGGGTGCTTCGAATAGGGCTACTATGCACACAAGCTTCTGCTTCCCTGAGGCCAACCATGGAAAAAGTTGTTGAGCTGTTAAGTAACTCAAATGTGGATGTTTGTGTACCAAATCAACCGCCTTTTTTGAGTACTGGCAATGGGTTGCTAAACTCAGATAGCTCCATTAGGTCTTACAGTACAAACAGTTTTGTTTCAAATGCATTGAAGAAAATTGGAACGTCCGAAGTTTCATCCTCAGAGACCTTCGGCACGCGCAGTTCAGAGGGACCATCAAGAAGTGAAGGGCCGATAAACCAAGCTTGA 5241 0.4654 MAYVRSRANPLLTTTLPYFLTWRTFGFRTVCSGRLGFSTQSQLDHDPPVAATKVLEVFKEEFEIGSRLITLETGKIARFANGAAVLGMGETKVLSTVTSAKGDAGRDFLPLTVDYQEKQFAQGLIPGTYMRREGAPKERELLCGRIIDRPIRPLFPAGFYHEVQVMASVLSSDGNQDPDVLAANASSAALMLSDIPWGGPIGVVRIGRIGGQFVVNPTMDELNFSDLNLVYACTRDKTLMIDVQAREISEKDLEAGLRLAHPEAVKYIEPQIRLAAKAGKSKKEYRLSMLSDSTLEKVRNLAEAPIESVFTDPNYGKFERGEALDKITQDVRRVLEEECDEESLKVLSKAVDTVRKKVVRKRIIAEGFRVDGRQLDEVRPLYCEAGNLPILHGSALFSRGDTQVLCTVTLGAPSDAQRLDSLVGPPTKRFMLHYSFPPFCTNEVGKRTGLNRREVGHGTLAEKALLAVLPPEDDFPYTVRVNSEVMASDGSTSMATVCGGSMALMDAGIPVREHVAGVSVGLVTEFDPISGEITDYRILTDILGLEDHLGDIDFKIAGTRKGVTAIQLDIKPAGIPLDIICECLEPARKARFQIIDHMNQEINAPHTQTDRNSPRLATLKYSNDALRNLIGPLGAVKSKIEEETGARMSVGDGTLTIIAKNQSVMDKVLEKIDLLVGREIEVGGIYKGVVTSIKEYGAFVEFNGGQQGLLHISELSHKPVSRISDVISVGQQLSLMCIGQDVRGNIKLSLKATLPRPEGMESNNAAEESILDTKDTRNIWAPVGNEYSTQEELGASKPEVGETKPSILIRSAAECDEEEKSLNQSSKRNLKSGNGSQLSRKSKSLRPNDPVHSTPRTSSHLAQHVIDSLSSLSIPFPHEKSKKSKPSVLNEAEDKAATPKAMKLGTEVTAKVDQIRAHGLVLDLGGGLRGMYRFEKDGKRDYEIGDELQVVCSGFSSRGIPVMSLSPTRVPLFSCYLLVAVGRAVMEKCEKNISPMGASWQAFSLGYFVNGCVCSITALGSPEYPTDQSKDDGKRRPNNSKKIKLGTHQSPTPPSLHKNKNQTPLSLSPSLTAMRPSSSSSCLLFSLLFLSLPPSLLSDPRISQAGLLCGASKAPLSSNYIPMFVQEMQSLSQTITSTSHKWASHSLNLSSHHIHIPIFALAHCFHDLSHTDCLLCYSASRTKLPRCLPSLSARIYLDGCFLRYDRFHFYSQPIDPLTDTLNCSSAYGVVPDEGGERRRFQTNVGDVVDHVVRVSVGNGLGFGVAEIGGVFALAQCWSTLRSEDCGICLRKAAREVRRCLPNREGRALNAGCYLRYSTHKFYNEAGEGGKDHKGSFRRGAGAIIAIVLSVAAVMVLFLSALYVVLSRLSKTNKGSNRLGQISISINKSSLNFKYETLEKATDYFNSSRKIGQGGAGSVFKGTLPNGRVVAVKRLVYNTRQWVDEFFNEVNLISGIDHKNLVKLLGCSIEGPESLLVYEYLPNKSLDQFIFEKNKSQILNWKQRFDIIMGTAEGLAYLHAGSKTRIIHRDIKSSNILLDENLTPKIADFGLARCFGADQTHLSTGIAGTLGYMAPEYLVRGQLTEKADVYSFGVLVLEILCGRRNNVFREDSGSLLQITWKLYRTNRLHEAVDPCLGDDFPEEELSRVLRIGLLCTQASASLRPTMEKVVELLSNSNVDVCVPNQPPFLSTGNGLLNSDSSIRSYSTNSFVSNALKKIGTSEVSSSETFGTRSSEGPSRSEGPINQA 1746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0535 1746 MobiDBLite consensus disorder prediction 878 900 - -
Mibi02g0535 1746 ProSiteProfiles Gnk2-homologous domain profile. 1102 1209 IPR002902 -
Mibi02g0535 1746 ProSiteProfiles Gnk2-homologous domain profile. 1222 1321 IPR002902 -
Mibi02g0535 1746 Pfam Protein tyrosine and serine/threonine kinase 1407 1672 IPR001245 GO:0004672|GO:0006468
Mibi02g0535 1746 MobiDBLite consensus disorder prediction 1024 1072 - -
Mibi02g0535 1746 Gene3D K Homology domain, type 1 612 677 IPR036612 GO:0003723
Mibi02g0535 1746 FunFam Cysteine-rich receptor-like protein kinase 3 1224 1321 - -
Mibi02g0535 1746 Gene3D - 680 753 IPR012340 -
Mibi02g0535 1746 SUPERFAMILY Ribonuclease PH domain 2-like 504 607 IPR036345 -
Mibi02g0535 1746 Pfam 3' exoribonuclease family, domain 1 377 510 IPR001247 -
Mibi02g0535 1746 Pfam 3' exoribonuclease family, domain 1 67 196 IPR001247 -
Mibi02g0535 1746 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 619 701 IPR036612 GO:0003723
Mibi02g0535 1746 SMART serkin_6 1404 1728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g0535 1746 CDD RNase_PH_PNPase_2 377 605 - -
Mibi02g0535 1746 Pfam Polyribonucleotide nucleotidyltransferase, RNA binding domain 295 374 IPR015848 GO:0003723|GO:0006396
Mibi02g0535 1746 FunFam Cysteine-rich receptor-like protein kinase 2 1480 1680 - -
Mibi02g0535 1746 MobiDBLite consensus disorder prediction 815 860 - -
Mibi02g0535 1746 FunFam Cysteine-rich receptor-like protein kinase 2 1369 1479 - -
Mibi02g0535 1746 FunFam Polyribonucleotide nucleotidyltransferase, putative 680 753 - -
Mibi02g0535 1746 TIGRFAM polynuc_phos: polyribonucleotide nucleotidyltransferase 64 752 IPR012162 GO:0003723|GO:0004654|GO:0006402
Mibi02g0535 1746 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1525 1537 IPR008271 GO:0004672|GO:0006468
Mibi02g0535 1746 Gene3D Transferase(Phosphotransferase) domain 1 1480 1681 - -
Mibi02g0535 1746 MobiDBLite consensus disorder prediction 1719 1746 - -
Mibi02g0535 1746 CDD STKc_IRAK 1410 1672 - -
Mibi02g0535 1746 SMART S1_6 903 966 IPR022967 -
Mibi02g0535 1746 SMART S1_6 681 751 IPR022967 -
Mibi02g0535 1746 SUPERFAMILY Ribosomal protein S5 domain 2-like 345 549 IPR020568 -
Mibi02g0535 1746 SUPERFAMILY Protein kinase-like (PK-like) 1389 1699 IPR011009 -
Mibi02g0535 1746 Hamap Polyribonucleotide nucleotidyltransferase [pnp]. 56 754 IPR012162 GO:0003723|GO:0004654|GO:0006402
Mibi02g0535 1746 Pfam 3' exoribonuclease family, domain 2 199 261 IPR015847 -
Mibi02g0535 1746 SUPERFAMILY Nucleic acid-binding proteins 675 755 IPR012340 -
Mibi02g0535 1746 ProSiteProfiles Protein kinase domain profile. 1404 1688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g0535 1746 Pfam S1 RNA binding domain 680 751 IPR003029 GO:0003676
Mibi02g0535 1746 SUPERFAMILY Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 278 380 IPR036456 GO:0003723|GO:0006396
Mibi02g0535 1746 SUPERFAMILY Ribosomal protein S5 domain 2-like 55 196 IPR020568 -
Mibi02g0535 1746 Gene3D - 1105 1209 IPR038408 -
Mibi02g0535 1746 Gene3D - 1231 1321 IPR038408 -
Mibi02g0535 1746 FunFam Polyribonucleotide nucleotidyltransferase 611 678 - -
Mibi02g0535 1746 FunFam Polyribonucleotide nucleotidyltransferase 56 286 - -
Mibi02g0535 1746 Gene3D - 289 611 IPR027408 -
Mibi02g0535 1746 Gene3D - 55 288 IPR027408 -
Mibi02g0535 1746 Gene3D Phosphorylase Kinase; domain 1 1365 1479 - -
Mibi02g0535 1746 MobiDBLite consensus disorder prediction 826 860 - -
Mibi02g0535 1746 MobiDBLite consensus disorder prediction 873 900 - -
Mibi02g0535 1746 Pfam Salt stress response/antifungal 1124 1205 IPR002902 -
Mibi02g0535 1746 Pfam Salt stress response/antifungal 1237 1318 IPR002902 -
Mibi02g0535 1746 PANTHER POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE 14 811 IPR012162 GO:0003723|GO:0004654|GO:0006402
Mibi02g0535 1746 SUPERFAMILY Ribonuclease PH domain 2-like 190 283 IPR036345 -
Mibi02g0535 1746 ProSiteProfiles S1 domain profile. 683 751 IPR003029 GO:0003676
Mibi02g0535 1746 MobiDBLite consensus disorder prediction 1043 1072 - -
Mibi02g0535 1746 FunFam Polyribonucleotide nucleotidyltransferase 2 mitochondrial 289 615 - -
Mibi02g0535 1746 CDD S1_PNPase 683 749 - -
Mibi02g0535 1746 CDD RNase_PH_PNPase_1 58 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0535 Mibi-ChrMibi02 5253565 5271325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0535 1083 1569 Receptor kinase-like Gene Family AT5G40380 57.172 0.0 559
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi02g0535 PK_Tyr_Ser-Thr 1.8e-44 CL0016