Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0526 ATGGACAAGAAACCGTACAATTCATCATCTCAGGACCCTGAAGTGAGGAAAGGGCCTTGGACCATGGAAGAAGACTTGATCCTTATTAACTATATTGCAAACCATGGTGAAGGTGTCTGGAACTCCTTAGCTAAAGCTGCTGGTCTTAAGCGTACTGGAAAGAGTTGCCGGCTCCGGTGGTTAAACTACCTTCGTCCTGATGTTAGAAGAGGGAATATTACACCTGAGGAACAGCTTTTGATCATGGAGCTTCATGCAAAGTGGGGAAACAGGTGGTCAAAGATTGCAAAGCACCTACCAGGAAGAACTGATAATGAGATAAAGAATTATTGGAGGACTAGGATTCAGAAGCACATTAAGCAGGCTGAGAATAATAATAATAACGCTACTTGCTCTCAACAACAACAACATGCGCAGTTTAGTTCGGAGACGCCAGAGCATCATCAAGCCAGCAGCAGCCACGTGTCCAACACCATGGCTGAATCACAGCCGATGGATACGTACTCTCCCTCCTCCTTCAATCATCAAGCGGCTCTCAATGATCATCAGCCATTCCCAACCCACCCTTTCCCTACCGCACTGGATCACTCCTCCATTTGCACCACTCACGAGAATAACTATTGGAGCATGGAGGATCTCTGGTCTAATATGCAAATACTCCATGGCGATTAA 672 0.4598 MDKKPYNSSSQDPEVRKGPWTMEEDLILINYIANHGEGVWNSLAKAAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNYWRTRIQKHIKQAENNNNNATCSQQQQHAQFSSETPEHHQASSSHVSNTMAESQPMDTYSPSSFNHQAALNDHQPFPTHPFPTALDHSSICTTHENNYWSMEDLWSNMQILHGD 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0526 223 CDD SANT 19 64 IPR001005 -
Mibi02g0526 223 CDD SANT 74 113 IPR001005 -
Mibi02g0526 223 FunFam Myb transcription factor 17 69 - -
Mibi02g0526 223 FunFam Myb-related protein 305 74 163 - -
Mibi02g0526 223 ProSiteProfiles Myb-like domain profile. 65 115 IPR001005 -
Mibi02g0526 223 Pfam Myb-like DNA-binding domain 17 64 IPR001005 -
Mibi02g0526 223 Pfam Myb-like DNA-binding domain 70 113 IPR001005 -
Mibi02g0526 223 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 119 IPR017930 -
Mibi02g0526 223 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 12 180 IPR044676 GO:0003700|GO:0006355|GO:0043565
Mibi02g0526 223 MobiDBLite consensus disorder prediction 129 190 - -
Mibi02g0526 223 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 64 IPR017930 -
Mibi02g0526 223 ProSiteProfiles Myb-like domain profile. 12 64 IPR001005 -
Mibi02g0526 223 Gene3D - 74 147 - -
Mibi02g0526 223 SMART sant 16 66 IPR001005 -
Mibi02g0526 223 SMART sant 69 117 IPR001005 -
Mibi02g0526 223 MobiDBLite consensus disorder prediction 129 181 - -
Mibi02g0526 223 SUPERFAMILY Homeodomain-like 14 111 IPR009057 -
Mibi02g0526 223 Gene3D - 17 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0526 Mibi-ChrMibi02 5118993 5122473 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0526 11 223 MYB Transcription Factor Family AT3G01530 54.460 5.00e-72 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi02g0526 Myb_DNA-binding 7.9e-15 CL0123