Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0518 ATGGAGCATGTATCAGAAAAAAGATTTCCTCTCAACGCAAAAGATTATAGGTTATATGAAGAAGTTGGCGAAGGCGTCAGTGCCACTGTGTATAGGGCACTCTGTGTGCCACTCAACAAAATAGTTGCCATCAAGGTTCTTGATCTCGAAAAGTGCAATAATGATCTGGATGGCATCAGGAGAGAGGTTCAAACAATGAGCTTGATTGATCATCCAAATCTTTTACGGGCACATTGTTCTTTCACTGCTGGACACAACCTTTGGGTTGTGATGCCCTACATGGCTGGGGGATCCTGCCTTCATATAATGAAATCTGACTATCCTGAGGGATTTGAAGAGCCTGTTATTGCTACTTTATTGCGGGAGGTTCTCAAAGCTCTTGTCTACCTCCATGCACACGGACACATACATAGAGATGTAAAGGCTGGGAACATTTTGATTGATTCTGACGGTATGGTCAAAGTAGCTGACTTTGGGGTGTCAGCATGTATGTTTGATGCTGGAGATAGGCAACGATCAAGAAATACTTTTGTTGGAACTCCTTGCTGGATGGCTCCAGAAGTCATGCAGCAATTACATGGATATGACTTCAAGGCAGATATTTGGTCATTTGGCATAACAGCACTTGAACTTGCTCATGGTCATGCCCCATTTTCCAAGTATCCGCCAATGAAAGTTTTGCTTATGACATTACAGAATGCTCCTCCAGGACTTGACTATGAAAGAGATAGGAGATTTTCCAAGTCGTTCAAAGAGATGGTAGGAACCTGCTTAGTGAAGGACCCAAAGAAACGGCCAACTTCAGAAAAACTTCTAAAACACCCTTTCTTCAAACATGCACGCTCCTATGAATATCTAAGTCGGACTATTCTAGATGGACTTGCTCCTCTAGGAGATCGTTTTAGGATATTGAAGGCAAAAGAGGCTGATTTATTGGTGCAGAATAAGGCTCTTTATGAGGATAAAGAACAACTATCACAGAAAGAATATATCCGAGGAATCAGTGCCTGGAATTTCAACCTTGAGGACTTAAAAAGTCAAGCCGCTCTTATTCAAGATGATGACATGTCGAATGCAGAAGAGCCAGATATGGATAAGAAGCTAAAAAACAAATGTAATGATAATGGGGTTCCTGCAGAAGGGTCATTGCCAGTAACAACTAACAATTCAGATGCTAAATCCACATTGGATAAGGAGGATGGGATCAGTGATCTTCAGGATTTGGAGAGTTCGCTTGCTTCATTTCCAATTAAACCTCTTGAAGCACTTAAAGGTTGTTTTGACATGGGTGAGGATGATGCAAATAACAATAGTCTCAGGGATTTAGACCAGGATTATGGAAGAAAAGAGAATGGAAGTTCTGGGCTTAGTTCAGTGCCGCAAAATCCTTTAACTGAGCATAAAAAGTATTTGAGTGGTTCCTTGGTACCTGATAAAAAGGTTGTTACTGATGGGGACAGGGATTATTTGCAAGGAAAATATAATTCTGATCGAAATCATAGTGGTCCGTTGTTATATCGCCAGAAGAGAGACAGCAACAATAACCTTGCATCCGGCGATGATGCATCAGAAGGAGCAATTATCCAGCGCAAAGGACGGTTTAAGGTTACTTCAGCAGATCTCAGTCCTAAGGGTCCTTCAAACTGCGCTTTTGGCATGGTTTCTGGAGGTTCTATTGGTCTACCAAATCAGAACTCTACAGTTGCTTCTATTCTTCCATCACTGCAGTTCATTTTGCAACAGAACAGCATGCAAAGGGAAGAAATTATTAAATTAATAAAGTATGTGGAGCAATCTTGTGGCAAGAATACTGAATCAGCAGAGGCAGGGATGGTTGATCTCTTGCAGGTACCACCTGCAACAAATAGGGAAAAAGAGCTGCATGCGCAGGTGGTTCAATTACAACAGAGTATTGGGAGTCTCATCGAGGAAGTGCAAAGACAAAAAATGAAAAATGCCCAGTTAGAGAAGCAGCTTAACTCTGTGACCAACAGAGTGGAAGAGTGA 2007 0.417 MEHVSEKRFPLNAKDYRLYEEVGEGVSATVYRALCVPLNKIVAIKVLDLEKCNNDLDGIRREVQTMSLIDHPNLLRAHCSFTAGHNLWVVMPYMAGGSCLHIMKSDYPEGFEEPVIATLLREVLKALVYLHAHGHIHRDVKAGNILIDSDGMVKVADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRRFSKSFKEMVGTCLVKDPKKRPTSEKLLKHPFFKHARSYEYLSRTILDGLAPLGDRFRILKAKEADLLVQNKALYEDKEQLSQKEYIRGISAWNFNLEDLKSQAALIQDDDMSNAEEPDMDKKLKNKCNDNGVPAEGSLPVTTNNSDAKSTLDKEDGISDLQDLESSLASFPIKPLEALKGCFDMGEDDANNNSLRDLDQDYGRKENGSSGLSSVPQNPLTEHKKYLSGSLVPDKKVVTDGDRDYLQGKYNSDRNHSGPLLYRQKRDSNNNLASGDDASEGAIIQRKGRFKVTSADLSPKGPSNCAFGMVSGGSIGLPNQNSTVASILPSLQFILQQNSMQREEIIKLIKYVEQSCGKNTESAEAGMVDLLQVPPATNREKELHAQVVQLQQSIGSLIEEVQRQKMKNAQLEKQLNSVTNRVEE 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0518 668 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g0518 668 MobiDBLite consensus disorder prediction 352 397 - -
Mibi02g0518 668 MobiDBLite consensus disorder prediction 434 448 - -
Mibi02g0518 668 MobiDBLite consensus disorder prediction 450 464 - -
Mibi02g0518 668 FunFam Serine/threonine-protein kinase BLUS1 5 93 - -
Mibi02g0518 668 Gene3D Phosphorylase Kinase; domain 1 5 92 - -
Mibi02g0518 668 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g0518 668 FunFam serine/threonine-protein kinase BLUS1 isoform X1 97 330 - -
Mibi02g0518 668 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Mibi02g0518 668 SUPERFAMILY Protein kinase-like (PK-like) 13 298 IPR011009 -
Mibi02g0518 668 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 6 649 - -
Mibi02g0518 668 CDD STKc_OSR1_SPAK 14 277 - -
Mibi02g0518 668 Coils Coil 638 668 - -
Mibi02g0518 668 Gene3D Transferase(Phosphotransferase) domain 1 97 293 - -
Mibi02g0518 668 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g0518 668 MobiDBLite consensus disorder prediction 495 520 - -
Mibi02g0518 668 MobiDBLite consensus disorder prediction 434 464 - -
Mibi02g0518 668 MobiDBLite consensus disorder prediction 486 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0518 Mibi-ChrMibi02 5037524 5044873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0518 1 665 MAP Kinase Kinase Kinase Kinase AT5G14720 66.860 0.0 944
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Mibi02g0518 Pkinase 3.3e-59 CL0016