Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0493 ATGGAGTCCGGCCGTCTTTTCTTCGGCTCCTCTGCTTGCCGCGGGAACATGCTCTTTCTCGGGAATGGTGATTCAGTTTATAGAGGGGGATCGATAATAAGCATGGAGGAAAGCTCAAAGAAACGACCATTTTTCAGCTCCCCTGATGAACTGTTCGATGAGGAATATTACGATGAGCAGTTGCCGGAGAAGAAGCGACGCCTCACTCCCGAGCAGGTGCTTATGCTGGAGAAAAGCTTTGAGGAAGAGAACAAGCTGGAGCCAGAACGGAAGACCGAGCTGGCCAAGAAGCTGGGATTGCAGCCAAGGCAAGTGGCTGTGTGGTTCCAGAATCGTAGGGCCCGTTGGAAAACCAAGCAACTTGAAAGGGATTACGATGTTCTCAAGGCATCCTACGACGCCCTCCTCTCAAAGTACGACTCCATTGTCAAGGACAATGAAAGTCTCAAATCAGAGGTGGTAGCCTTAAACGAGAAGCTTCTAGCTAAAGAGATGCCATCAGGAGAAGCATTAGGAGAAGAAAAAGCAGAGCCACTTATAATGGAACTAGCCCAAATGTCAACCCTGCCTTTAAACGTGAAGTTGGAGGACAGACTCAGCAGTGGAAGTGGTGGAAGTGCAGTGGTGGATGAGGATGCTCCCCAGCTTGTTGTGGACAGCGTTGATTCGTACTTTTCTGCTGAGAACTTTGATGGATGCATGACCAGATCGGAGGAGGATGATGGCAGCGACGATGGTCAGAGTTACTTCCCTGATGTGTTTGTGGTCCCTCAACCTGAGCACCAAAACCATGAGGAGGGAGAGGCCTTGTATTGGTGGGCGTGGTCTTAA 831 0.5006 MESGRLFFGSSACRGNMLFLGNGDSVYRGGSIISMEESSKKRPFFSSPDELFDEEYYDEQLPEKKRRLTPEQVLMLEKSFEEENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDVLKASYDALLSKYDSIVKDNESLKSEVVALNEKLLAKEMPSGEALGEEKAEPLIMELAQMSTLPLNVKLEDRLSSGSGGSAVVDEDAPQLVVDSVDSYFSAENFDGCMTRSEEDDGSDDGQSYFPDVFVVPQPEHQNHEEGEALYWWAWS 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0493 276 ProSitePatterns 'Homeobox' domain signature. 94 117 IPR017970 GO:0000981|GO:0006355
Mibi02g0493 276 Coils Coil 139 159 - -
Mibi02g0493 276 CDD homeodomain 64 120 IPR001356 GO:0003677
Mibi02g0493 276 Gene3D - 58 125 - -
Mibi02g0493 276 MobiDBLite consensus disorder prediction 233 252 - -
Mibi02g0493 276 Pfam Homeobox associated leucine zipper 119 160 IPR003106 GO:0006355|GO:0043565
Mibi02g0493 276 PRINTS Lambda-repressor HTH signature 90 99 IPR000047 GO:0003677
Mibi02g0493 276 PRINTS Lambda-repressor HTH signature 99 115 IPR000047 GO:0003677
Mibi02g0493 276 Pfam Homeodomain 64 117 IPR001356 GO:0003677
Mibi02g0493 276 ProSiteProfiles 'Homeobox' domain profile. 59 119 IPR001356 GO:0003677
Mibi02g0493 276 FunFam Homeobox-leucine zipper protein HAT5 57 121 - -
Mibi02g0493 276 SUPERFAMILY Homeodomain-like 56 121 IPR009057 -
Mibi02g0493 276 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 53 211 IPR045224 GO:0003700
Mibi02g0493 276 SMART HOX_1 62 123 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0493 Mibi-ChrMibi02 4764511 4766614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0493 1 275 Homeobox Transcription Factor Family AT3G01470 58.657 1.31e-96 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mibi02g0493 Homeodomain 1.5e-18 CL0123