Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0490 ATGATCGGCACAAGAGATATATGGCTTCTGGCTGCACTTATTATAGCAGTTGTATTGATAATAACTATAACTGCATCCGTCTTGTTTCATAAACTTTCCAAATCAACCTGCCCCAGAAATGAAGCAACATCAGGGGAAGTTCTGTTGAAGAATAATGCTTGTCCAAGAGTTCCTCTAATGGAAGTCTACTCTGCTACAAACCATCTAAATGAAATGAATGTCATTGGTGAAGGAACTTTTGGGAAGGTTTATAATGGAACAATGACAAATAATCAACATGTTGCAATAAAACACATAATCTATGATGATGGAAGCATGGAGACTTTTGTCAGAGAAATTACAAACTTATCACATGTCAGACATCCAAATCTCGTCGCTTTGTTGGGTTGCTGTGTTGAGAGAGATGATTGTTTCCTTGTCTATGAACTTTGCCCCAATGGAAGCCTTGCAGAGTGGCTATTTGGCAAGAACAAGGTTCTGTCCTGGATAGAGAGGCTTAATATTGCAATTGGCACTGCAAAAGGTCTTTGGTTCCTTCACACATATCCACAAGGCTGCATCGTTCACCGTGATGTCAAGCCAACAAACATTCTCTTGGGACCGAAGTTTGAAGCAAAGCTATCAGATTTTGGACTCTCTAAAGTTTTAGAGGTGGGTGAAACATATGTTAGCTCAGAAGTGAGAGGAACTTTCGGATATCTTGATCCTGAGTACCAAAGCAACCACCGTGTAAATTCATCTGGGGATGTCTTTAGCTTTGGCGTGGTACTTCTGCAGATCCTCTCTGGGAAGAAGGCTGTCAATTTGAAACTCAAGAAACCCATGACTCTGAATAAAATGGCAAAAGCACTCACAAGGAATGGCAGCATAACAGAATTTGTTGATCCTAAACTTCAAGGAAAGTACTCGGAAGAAGCATTTGATTTTACCCTTCATCTTGCTTTATCATGCACAGACCTTAACCAACAACGTCCATCCATGGAGCAGGTTGTCAAAAGATTGGAAGAGGCCCTTCTAATTTCAATGAAGACGGTTTCTGCAGCAGACACTTCAGTGGAAAATTCTACAATTCTATAA 1077 0.4039 MIGTRDIWLLAALIIAVVLIITITASVLFHKLSKSTCPRNEATSGEVLLKNNACPRVPLMEVYSATNHLNEMNVIGEGTFGKVYNGTMTNNQHVAIKHIIYDDGSMETFVREITNLSHVRHPNLVALLGCCVERDDCFLVYELCPNGSLAEWLFGKNKVLSWIERLNIAIGTAKGLWFLHTYPQGCIVHRDVKPTNILLGPKFEAKLSDFGLSKVLEVGETYVSSEVRGTFGYLDPEYQSNHRVNSSGDVFSFGVVLLQILSGKKAVNLKLKKPMTLNKMAKALTRNGSITEFVDPKLQGKYSEEAFDFTLHLALSCTDLNQQRPSMEQVVKRLEEALLISMKTVSAADTSVENSTIL 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0490 358 SMART serkin_6 69 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g0490 358 Gene3D Phosphorylase Kinase; domain 1 31 143 - -
Mibi02g0490 358 FunFam probable receptor-like protein kinase At5g59700 144 353 - -
Mibi02g0490 358 ProSitePatterns Protein kinases ATP-binding region signature. 75 97 IPR017441 GO:0005524
Mibi02g0490 358 Pfam Protein kinase domain 71 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g0490 358 SUPERFAMILY Protein kinase-like (PK-like) 51 335 IPR011009 -
Mibi02g0490 358 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Mibi02g0490 358 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 10 336 - -
Mibi02g0490 358 Gene3D Transferase(Phosphotransferase) domain 1 144 353 - -
Mibi02g0490 358 ProSiteProfiles Protein kinase domain profile. 69 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g0490 358 Coils Coil 317 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0490 Mibi-ChrMibi02 4738677 4740723 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0490 59 335 Receptor kinase-like Gene Family AT1G07650 42.105 8.12e-62 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Mibi02g0490 Pkinase 9.3e-45 CL0016