Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0489 ATGGCTACTCGCATTCTGCATTCTGTCACTTCTTCTTCTGCCTCTGCTTCCAGACGTTGTTTGGGTCTACATCGTTGGTGGGTGAGAGGTATTAGTGGAATTCATGAATCTGCTGCTGCTGCTGCTGAGGAGCCTATTGCCCCGCCTGTTCAAGTAGATCACACTCAGCTTCTCATTGATGGACAATTTATTGATGCTGCTTCTGGAAAAACCTTCCCAACATTTGATCCTAGGACAGGAGATACAATAGCCAATGTTGCTGAAGGTGACAGAGAAGATGTGGATCGTGCTGTCTCTGCTGCCAGGAGGGCCTTTGATGAGGGACCATGGCCAAAGATGACAGCTTATGAAAGATCACGCATAATTCTGCGTTTTGCTGATTTACTGGAAAAGCACAATGATGAAGTTGCAGCACTTGAAACATGGAACAACGGAAAGACCTATGAGCAGGCTGCAAATGTTGAAGTACCTATGGTGACACGTATATTTCGATATTACGCTGGCTGGGCGGATAAAATTCATGGCCTCACAGTTCCATCTGATGGACCCTACCATGTCCAAACCTTACATGAGCCCATTGGGGTGGCAGGCCAGATTATTCCTTGGAACTTCCCCCTTCTTATATACTCATGGAAGGTAGGGCCTGCTTTAGCCTGTGGTAATACGGTTGTTCTCAAAACTGCAGAGCAAACACCTCTCTCTGCCCTCTTTGTCTCAAAGCTATTTCATGAGGCTGGACTTCCTCCCGGTGTTCTAAATATTATATCTGGCTATGGTCCTACCGCTGGTGCAGCTCTATGCAGCCACATGGGTGTTGACAAGCTTGCTTTCACAGGATCCAGTAGCACTGGCAAGATTGTAATGGGACTTTCTGCACAAAGTAATCTGAAGCCAGTGACCCTGGAACTGGGTGGAAAGTCTCCATTCATTGTGTGCAAGGATGCTAACATTGATGATGCTGTTGAGACTGCACATTCTGCTTTATTCTTTAATCAGGGTCAATGTTGTTGTGCCGGTTCTCGTACATTTGTACATGAAAGCATATATGATGAGTTCGTGGAAAAAGCAAAAGCCCGTGCTCTCAAACGTATTGTTGGAGATCCTTTCAAAAGAGGGGTTGAGCAAGGTCCTCAGATTGATTCAACACAATTCAAGAAGATCCTCAAGTACATACAATCAGGCATTGATAGTGGAGCTACTCTTGAATCCGGCGGTCAAAGAATTGGCTCCAAAGGTTACTATATACAACCAACTGTTTTCTCAAATGTCCAGGACAACATGTTGATAGCAAAAGATGAAATCTTTGGACCAGTGCAGACCATCTTGAAATTCAAGGATCTTGAGGAGGTTATAAAAAGAGCAAATTCAACATCCTTTGGGCTGGCTGCTGGAGTTTTTACTCAGAATTTGGATACTGCCAACACATTGATGCGCGTGTTGCGAGTTGGAACGGTGTGGATAAACTGCTACGATGTATTTGATGCAGCAATACCTTTTGGTGGGTATAAGATGAGTGGGCAAGGAAGAGTAAGGGGAATCTATAGCCTTAGCAATTACCTGCAAATCAAGGCTGCTGTTACTCCTTTGAAAAATCCAGCTTGGTTGTAG 1608 0.4478 MATRILHSVTSSSASASRRCLGLHRWWVRGISGIHESAAAAAEEPIAPPVQVDHTQLLIDGQFIDAASGKTFPTFDPRTGDTIANVAEGDREDVDRAVSAARRAFDEGPWPKMTAYERSRIILRFADLLEKHNDEVAALETWNNGKTYEQAANVEVPMVTRIFRYYAGWADKIHGLTVPSDGPYHVQTLHEPIGVAGQIIPWNFPLLIYSWKVGPALACGNTVVLKTAEQTPLSALFVSKLFHEAGLPPGVLNIISGYGPTAGAALCSHMGVDKLAFTGSSSTGKIVMGLSAQSNLKPVTLELGGKSPFIVCKDANIDDAVETAHSALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRIVGDPFKRGVEQGPQIDSTQFKKILKYIQSGIDSGATLESGGQRIGSKGYYIQPTVFSNVQDNMLIAKDEIFGPVQTILKFKDLEEVIKRANSTSFGLAAGVFTQNLDTANTLMRVLRVGTVWINCYDVFDAAIPFGGYKMSGQGRVRGIYSLSNYLQIKAAVTPLKNPAWL 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0489 535 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 329 340 IPR016160 GO:0016491
Mibi02g0489 535 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 39 524 - -
Mibi02g0489 535 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 494 IPR016163 GO:0016620
Mibi02g0489 535 Pfam Aldehyde dehydrogenase family 64 524 IPR015590 GO:0016491
Mibi02g0489 535 CDD ALDH_F2BC 52 527 - -
Mibi02g0489 535 SUPERFAMILY ALDH-like 52 528 IPR016161 GO:0016491
Mibi02g0489 535 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 59 337 - -
Mibi02g0489 535 FunFam Mitochondrial aldehyde dehydrogenase 2 307 496 - -
Mibi02g0489 535 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 301 308 IPR029510 GO:0016491
Mibi02g0489 535 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 59 523 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0489 Mibi-ChrMibi02 4735004 4738182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0489 1 535 Aldehyde Dehydrogenase Gene Family AT3G48000 72.677 0.0 838