LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi02g0486	ATGGATCTGGAGTCTGTCACCTACAGAAATTCGATCAAGAAGGAATCATGGAAAACGGTGTTGACTCTGGCTTATCAAAGCCTTGGAGTTGTCTATGGAGATTTGAGCACCTCCCCTCTTTACGTCTACAAGAGCACTTTCGCCGAGGATATTCAACATTCGGAGACCAATGAAGAAATCTTCGGGGTTTTGTCTTTTGTGTTCTGGACCCTTACGCTCATACCCCTCATCAAGTATGTCTTCATTGTGCTTCTAGCAGATGACAATGGTGAAGGAGGCACCTTCGCTCTCTATTCTCTGTTATGCCGCCATGCTCGTGTTAGCTTACTGCCCAATACCCAGCTCGCCGATGAGGACTTAACGGAGTATACGAAAGATGGGATTGTGGAAGACGATAAGAGAGCCGTTGGGTCTACCTTGAAATCGGTGTTGGAGAAACACAGGGGACTTCAGAGGCTGTTGCTTGTTCTGGCTTTAATTGGGACTTGCATGGTCATTGGGGATGGCGTGCTCACACCAGCACTTTCTGTATTTTCTGCTGTGTCGGGACTCGAGCTTTCTATGTCAAAAGAGCAGCACCGATATGTTGAGGTTCCAGTTGCTTGTATAATACTGGTATTTTTGTTTGCGCTCCAACATTATGGGACCCATCGTGTGGGATTCCTGTTTGCACCTGTTGTGGTTACCTGGCTGCTATGCATCAGCGCTATTGGCATTTATAATATCTTTCATTGGAATCCACACGTATATGAAGCTCTCTCCCCTTATTATATGTTCAAGTTCCTGAAAAAGACTCAAAGGGGAGGTTGGATGTCATTGGGTGGAATCCTTCTGTGTATAACAGGTTCAGAAGCCATGTATGCAGATTTAGGACACTTTTCACAATTGTCAATTAAGATTGCTTTCACCTTTTTGGTGTACCCATCTCTAATCCTAGCATACATGGGACAAGCTGCTTATCTTTCCAAGCATCACTCCCTTGAGAGTGACTACAGAATTGGTTTCTATGTATCTGTACCGGAGAAAATCAGATGGCCTGTTCTTGTAATAGCCATACTTCAAGCGGTGGTTGGAAGTCAAGCTGTCATCACTGGGACTTTCTCAATAATCAAACAATGCTCGGCTTTGAGCTGCTTCCCCAAGGTCAAAATTGTTCATACATCTTCTAAGATACATGGTCAGATTTACATTCCAGATATCAACTGGACTTTGATGCTCCTTTGTTTGGCCATTACGGTTGGATTTAGGGACACCAAGCGCATGGGAAATGCGTCAGGATTGGCTGTCATAACTGTCATGGTGGTGACCACTTGCCTGATGTCTCTAGTCATGGTCTTGTGCTGGCACAAGAGTGTTGTTCTGGCCATTTGCTTTATATTCTTCTTTGGCTCCATTGAAGCACTCTACTTCTCTGCCTCCCTCATCAAGTTCCTTGAAGGGGCTTGGGTTCCTATTGCCCTCTCATTCATCTTCCTTATTGTCATGTATGTATGGCACTATGGCACAATTAAGAAATACGAGTTTGATGTTCAAAATAAGGTCTCCATCAATTGGCTTCTCAGTCTCGGCCCCACATTAGGAATTGTAAGGGTCAGGGGAATAGGCCTCATACACACTGAGCTTGTATCAGGGATTCCGGCTATTTTCTCCCACTTTGTTACCAATCTGCCTGCTTTTCATCAGGTTGTAGTATTTCTCTGCATTAAATCAGTCCCAGTGCCACATGTCAGACCTGAAGAAAGGTTCCTGGTGGGTAGGGTTGGCCCCAAGGAGTATAGGCTTTATCGGTGTATAGCAAGGTATGGCTATCGTGACATTCACAAGGATGACATGCAATTTGAACAAGATCTTGTTTGCAGCATAGCCGAGTTTATCCGGTCAGATACTTCCAAATCTGGCTTGGAATTAAACAATGTTGAAGATGATGCAAAGATGACGGTTGTTGGGACCTCAGCATCAAAATTCGAAGGCGTAAGAATTTGTGAGGATGATCTAGATTCCTGTCAAATGGAAGGTAGTACTTCAGAGTTGAGGGAGTTTAAATCTCCTGAGAAAGTGAAGAAGCGAGTCAGATTTGTGGTGCCAGACAGTCCAGAGATTGCTTTTAATGCCAAGGAGGAGCTGCGGGAACTAATGGAAGCAAGGGAAGCAGGAATGGCGTTCATAATGGGTCACTCATATGTGAGAGCAAAAAGAGGATCAAGCTGGATAAAGAAAGTTGTGATCAATTATGGGTATGATTTCTTAAGGAGAAACTCCAGAGGACCAACATATGCTTTAAGCATCCCTCATGCATCTACCCTGGAGGTGGGCATGATCTATCATGTCTGA	2331	0.444	MDLESVTYRNSIKKESWKTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSETNEEIFGVLSFVFWTLTLIPLIKYVFIVLLADDNGEGGTFALYSLLCRHARVSLLPNTQLADEDLTEYTKDGIVEDDKRAVGSTLKSVLEKHRGLQRLLLVLALIGTCMVIGDGVLTPALSVFSAVSGLELSMSKEQHRYVEVPVACIILVFLFALQHYGTHRVGFLFAPVVVTWLLCISAIGIYNIFHWNPHVYEALSPYYMFKFLKKTQRGGWMSLGGILLCITGSEAMYADLGHFSQLSIKIAFTFLVYPSLILAYMGQAAYLSKHHSLESDYRIGFYVSVPEKIRWPVLVIAILQAVVGSQAVITGTFSIIKQCSALSCFPKVKIVHTSSKIHGQIYIPDINWTLMLLCLAITVGFRDTKRMGNASGLAVITVMVVTTCLMSLVMVLCWHKSVVLAICFIFFFGSIEALYFSASLIKFLEGAWVPIALSFIFLIVMYVWHYGTIKKYEFDVQNKVSINWLLSLGPTLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPEERFLVGRVGPKEYRLYRCIARYGYRDIHKDDMQFEQDLVCSIAEFIRSDTSKSGLELNNVEDDAKMTVVGTSASKFEGVRICEDDLDSCQMEGSTSELREFKSPEKVKKRVRFVVPDSPEIAFNAKEELRELMEAREAGMAFIMGHSYVRAKRGSSWIKKVVINYGYDFLRRNSRGPTYALSIPHASTLEVGMIYHV	776

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi02g0486	776	TIGRFAM	kup: potassium uptake protein	23	776	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Mibi02g0486	776	Pfam	K+ potassium transporter	25	605	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Mibi02g0486	776	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	13	775	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi02g0486	Mibi-ChrMibi02	4720742	4725687	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi02g0486	1	774	Inorganic Solute Cotransporters	AT5G14880	77.920	0.0	1241