Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0481 ATGGGAGCCAAATTTACTGATAATTTAACCCTCTTAATTTTGAGCATGGTTGATGGGTCTCCCTTAATGATCTTTGGGATGTCAGAAAGCATGTATCGTAATTGGTTTTCTAACCATACCCACTTGAAGATATCTTGGATTCATCATCAAATCCAGCAAAAAGATGGTTCCTTGAGCTATCCACCTCCTGTTTTGCCTTCATCTTCGCCCCCATATCCCGGTGCTTTCCACAAAGAAACAGGACCTTCTTCCTCGTCTGGTACTAGGATTAGTCCTGCTGTTCTTTTCATTATAGTGATTCTAGCCGTGCTCTTCTTCATTTCTGGCCTTCTACACCTGCTTGTCAGATTTCTCATAAAGCACCCACCTTCCTCAGCATCTGAATCTAATAGACACCAAGAAATCTCAACCTCCGATGCTCTTCAAAGACAACTCCAACAGCTCTTCAATCTTCATGACTCTGGTCTGGATCAAGCTTTCATCGACGCGCTACCTGTTTTCCAGTATAAAGAGATAGTAGGTCTGAAAGAACCATTTGACTGTGCTGTGTGCCTTTGTGAGTTTTCTGAGAAGGACAAGCTCAGATTGCTTCCAATGTGCAGCCATGCCTTTCATATTACTTGTATAGACACATGGCTTCTATCCAATTCCACCTGCCCACTCTGTAGAGGAACCCTTTTAACTCCTGGGTTTTCAATTGAAAACCCCATCTATGATTTTGATGATTTAAGGGAAGAGGATGGATGTAACGGTGAGAATGGGTTCCCAACTTTTAGACAAAAAACTGTTGAAATCGAAGAAACTGTAGAGAAAGGAGTGTTCCCTGTAAAACTTGGTAAATTCAGAAGGCTGAATGTGGAGGCAGGGGAAAGTGGAGGAGGAGAGACGAGTAGCAGTAATTTAGATGCAAGAAGGTGTTTCTCAATGGGATCTTATCAGTATGTGTTGGCCAATTCAGACCTCCGAATTGCCTTAAACGATGACCGTCAAGGCCGCGAGGTAAGGCTAACAAAAGGGACTGAACAACCTGAGAAGCTTTCCTTGGAGGAAGCAAAGAAGATTAGAAGTGTGAGTAAAGGTGAGAGCTATTCTGTTTCCAAGATCTGGCAATGGTCTAAGAAGAGCAAGTTTCCTACTTTGTCCGAAGAAGATCAAGTGGGCATGCCATCTTCTCTTAAAACGGACCTGCCATGGATGAGTAAAACAGATGGGAAATAG 1218 0.4294 MGAKFTDNLTLLILSMVDGSPLMIFGMSESMYRNWFSNHTHLKISWIHHQIQQKDGSLSYPPPVLPSSSPPYPGAFHKETGPSSSSGTRISPAVLFIIVILAVLFFISGLLHLLVRFLIKHPPSSASESNRHQEISTSDALQRQLQQLFNLHDSGLDQAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDKLRLLPMCSHAFHITCIDTWLLSNSTCPLCRGTLLTPGFSIENPIYDFDDLREEDGCNGENGFPTFRQKTVEIEETVEKGVFPVKLGKFRRLNVEAGESGGGETSSSNLDARRCFSMGSYQYVLANSDLRIALNDDRQGREVRLTKGTEQPEKLSLEEAKKIRSVSKGESYSVSKIWQWSKKSKFPTLSEEDQVGMPSSLKTDLPWMSKTDGK 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0481 405 Pfam Ring finger domain 180 223 IPR001841 -
Mibi02g0481 405 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 85 369 - -
Mibi02g0481 405 SMART ring_2 181 222 IPR001841 -
Mibi02g0481 405 FunFam RING-H2 finger protein ATL46 143 228 - -
Mibi02g0481 405 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 156 228 IPR013083 -
Mibi02g0481 405 ProSiteProfiles Zinc finger RING-type profile. 181 223 IPR001841 -
Mibi02g0481 405 MobiDBLite consensus disorder prediction 380 405 - -
Mibi02g0481 405 SUPERFAMILY RING/U-box 160 229 - -
Mibi02g0481 405 CDD RING-H2_PA-TM-RING 180 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0481 Mibi-ChrMibi02 4694584 4697281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0481 84 384 C3H Transcription Factor Family AT2G18650 40.580 8.13e-61 201