Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0476 ATGCATGTGTCGGGAGGTGAGGAGTGGAAACAGAGGCGGCACATGTGGCCAGTCCCTGCCACCGCGACCACTGTAGCTCCCGCAGCCGATTCTTCATCATCCGAATTCATATGCAAAGATGGACGCGAGATTCGTGTTGGTGATTGTGCACTTTTCAAGCCACCCCAAGATTCCCCACCCTTTATAGGAATAATTCGCAAATTAACATTGAAGAAAGAAGAAAGTCCGAGTTTAGAAGTGAATTGGCTTTACCGACCTGCTGATCTGAAGCTTGCCAAAGGGATCCAATTGGAAGCTGCCCCAAACGAGGTCTTTTACTCCTTTCACAAGGATGAAACACCTGCTGCATCATTACTCCATCCGTGTAAAGTTGCATTCCTTCGTAAAGGTGTTGAACTTCCTTCAGGGATATCCGCATTTGTCTGTAGACGAGTGTATGACATTGAGAGTGAGCGTTTATGGTGGCTAACTGATAAAGATTACATTAATGAACGACAAGAAGAAGTTGACCAGCTATTAGATAAGACAAGACTAGAAATGCATGGGGCAGTGCAGTCAGGAGGCCGTTCTCCAAAACCCTTGAATGGTCCGACACCAACACCTTCACTGAAATCTGGTTCTGATAGTGTTCAAAATAGTTCTTCTTTTGGTTCACAGGGTAAGGGAAAGAAGAGAGAAAGGGGTGATCAGGGATCTGATTCATCTAAAAGAGAACGGTTAATCAAAACAGAAGATGGTGATACTGGTCAACATAGGCCAGAAAACATGTTAAAGTCTGAGCTTGCTAAAATTACTGAGAACGGTGGTCTTGTGGACTTTGAGGGAGTTGAAAAACTGGTACAGCTCATGCAACCTGACAGTGCTGATAAGAAAATAGATTTGACTGGGCGAATAATGCTTGCCGATGTAATAGCAGTCACAGATCGGTTTGATTGTCTTGGATGGTTTGTGCAGCTCAGGGGTCTGCCTGTATTAGATGAATGGCTCCAGGAGGTCCATAAGGGGAAAATTGGTGATGGTAATGCGCCTAAAGAAAGTGACAAGCCTGTTGAAGAATTGCTGTTAGCATTACTTCGGGCATTGGATAAGCTCCCAGTGAACCTTCATGCCTTACAGACTTGTAATGTTGGAAAGTCTGTGAATCATTTACGCACCCACAAAAATTCAGAAATTCAAAAGAAAGCAAGGAGCTTAGTTGACACTTGGAAGAAACGTGTTGAGGCTGAAATGAATATTAGCGATTCAAAATCTGGATCTAGCCGGGGCGTTTCTTGGCCAGCAAAGCCTGCATCTTCTGAGGTGTCTCATGTTGGAAGTAGGAAAACAGGTGGATCTGCTGAGGTTGCTGCAAAGAGCTCTACAATGTTAATGTCTGCATCCAAAAACTCTCAGGCTAAGATTAGCCCAGGAGAATCTGTGTCCAAGCTCTCACCATCTTCCACTTCAACTAAAGTCACTACCACCTTAGTAGCCTGTAATTCAAAGGAGCAAAACTTTAAAGCTGGAGCTGGAACATCAGATTCACCCTTGACACCTATTAAGGAGGAAAGGAGCAGCAGTTCTAGTCAGTCTCAAAACAACAGTTTATCTTGTTCTAGTGAACAAGCAAAAACTGTTGGTTCTTGTAGGGAAGATGCAAGGAGCTCCACTGCTGTGTCAATGAGTGCCAGCAAAATTCTTGGCGGTGCATCTCGGCCCCGGAAATCAAGCAATGGTCTGCATGGGTCTGCTTTAACTGCAGTTCAAAAGGAGCCCCATTCTGGAAAAAACTTGAGTAGAAATTCAGCTTCAGAGAAGGTTTCTCCGAATCAGCCAGCCCATGAAAAATCACATGATGTGCCTCTTCCTGATCATGGAACTAATCAGAGACTGATTGTTAGGTTGCCAAATACTGGCCGAAGTCCTGCCCGGGGAGCTAGTGGGGGCTGTGAAGATCCTGCAATTCTGCCTGGCAAAGCCTCACCTCCTGGAGACAAACATGAGAATGTGGATAGAAGAGTGAAATCCAAAACTGATGGTTCTCAGATTAATGTCTTGAATATGGCCACTGATGTTTGTGATGCAAGCGAAGCTGTGGCTGATTATGAGGAAGGTAATGACTCACCAACTGGTGAAGGATGCAGGGCCAGTGAAGATGGTGATAAAGTCACGGAAATATCAAAACCAACCAGCTCGTCCGGATTTCTTTCCAGATCAGGGCAGACTTATGACGCTTCCCTGAGCTCCATAAATGCGCTAATTGATAGTTGTGTGAAATTTTCTGAAGCAAATCCTTGTGTGTCCCCTGTTGATGATGCTGGGATGAACCTACTTGCTACTGTAGCTGCTGGAGAAATATCCAGGTCAGAAAATGTGACGCCAGCTGTTTCTCCTGTGAGGAAGTCTCCTGCAGCAGATGAGTCATGCTCAGGCAATGATAGTAAGTTAGAACATTCTGGTGAAGCAGCTGTTTGCGCTCTTGAACATCTGAAGAGTGGTGCTACTATAGATCATGTAAACACAGTTGATCCCAAGCATGATTTAAGGCATACCGTAGGATCAAAATCATGTGATATGTCTGGAGATGGTGAAACTACACAATCTGGTTGCAAAGAGAAAACTATTGATGGTAAAATTCAAACGAATTCTTCCCCTACAGATTTGTCGCATAATGTGGAAGGTCCATTCTCTGGGCCTGAAATCAAAGAGGAAGCTTCTGAAACAATATTGCCTTCTGAAAACGAGAATGCTGCAGAGCCTGAGGGAGCTAGTCCGCCTCATGAGCAGAGAAAATTGGAAACTCAGGCTAAGAGCAGCAATAATTCAGACTCTAAAAGAAAAACAAGGGCTTCTAGTGATGAAGATCGGAAGGTTGATCATGTTAATGAGAGGAAGATGGACAATGAAGTTTCAGTTTGTGAAGGGCCTCATGTAAGTCTAAAAATAGAGAAGGAAGTGTGTGAAAAATCACCCGAATCATCTACAGGTTTGGGTAATGAGAACCAGATTAGTGGGGATAAAGTGGCAGGTGGTATCATCTCAGTGCAGAAGCCCACTCCTCTGGTAGAAAATAATGAGTATAGTGAGGGCAGGAATGAGAATGTTGTGGTATCGCCTTCTGCCCCTAGTCATCCTATGATGGAATCTAAGGTTGTGAGTGCTGTTGACGTGAAACCATGTGAGGTGGAGCATAGCAAGGAAAGACAAAGGGATCTGGACTCATCTGGGCCTGCTGTCAACAAGCAATATACTGCTGAGAATTTGGATAGAAAAGAGGTTATCGGTCTTGGCATTGATTCGTCTGTACAGTCAGAGTCTCCAAAAATAACTGTGCAAGAGAATGAAGTGCCAAAAAAATCTTCTGGGTTTAATTTGGATAGAGTTGTGTCTGATGGTGCAGCAGAACAACATGCCTCTGGCTCACTTATTGCCAGAGAGTCGGATATAACAGTGAAGCTGGACTTTGATTTAAATGAGGGATTTCCTGTTGATGATGTGAATCAAGGGGATGCTGTGAGACAGGAAGAACCGATTCCATCATCTGCAGTCCACGTTCCGTGCCCATTGCCTTTTCCTATTTCTTCCATGTCTGGGGGCTTCCATGCTGCGATTACTGTGGCTTCTGCTGCCAAAGGGCCTGTTATTCCACCAGAGAACCCGTTGCGGAGTAAGGGGGAACTTAGGTGGAAAGGGGCTACCAGTGCATTCCGACCAGCTGAGCCCAGGAAAAACACAGAGCAGCCATTAAATACCAGTGATAGTGCTACCAAGCAAGGCCGGGCTCCTCTAGATTTTGATTTGAATGTGCCTGATCAAAGATGTTTTGAGGATGTGGCTTCCCATGGCTCTTCAGAGACTTGCTTAGAATCCTTGCCTCGTGAGCGTGGGATTGCAGGACTTGATCTTGATTTAAACCGAGTTGATGAGACTCCTGATTGTGGTTATTTTTCTGTGAGCAAACTGGATATTCCTTCTTTACCAACTAAACCTTCATTATCTGGTGGGTTATCCAGCGGTGGAAATGTATCAAGAGACTTTGATTTAAATAATGGGCCAGGCCTTGATGAAGTTGGCACTGACGCCCCAGCACGTAGCCAGCAGATAAAAAGTACTGTTCCATTGCCTTCGATTGTTCATGGTGTAAGAACAAATAGTGCTGATTATGGGAATTATTCATCATGGTTTCCTTCAGGCACCTCCTATCCTGCAATCAATGTCCCACCACTTCTACCTGGTAGAGGAGAACAGAGCTTTGTTAATGGTCCTGGAGCACAGCGAATTTTGGGTCCTCCAGGTAGCACTCCATTTGGTCCTGAAATCTATAGAGGGGCAGTTCTTTCATCCTCTCCTGCTGTTGCATACCCTTCCAGTACACCATTTCAGTACCCAGGATTTCCTTTTGAAACCAATTTTCCTTTGTCTTCAAATTCCTTTTCTGGCTGTTCAACACCCTTCATGGACTCCTCAACGGCTGGTGGACTTTGCTTTCCTACCATGCCCTCACAGCTAGTTGGGCCTGGTGGTGTTGTCTCATCCAATTTTCCCCGTCCTTATGTTATGAGTCTTCCAGGTGGTACAAGTAATGTGATACCTGAAAGTAGAAAATGGGGAGGTCAAAGTCTGGATCTTAATTCAGGCCCTGGTGGTGCAGATACAGAACGGAGAGATGATAGATTGCCTTCAGGATTGAGGCAACCTCCTGTCCCAAGTTCCCAAGCCTTGATGGAGGAACAGATGAAGATGTTTCAGGTGGCAGGAGGTGTATTGAAGAGAAAGGAACCTGATGGTGGTTGGGATGGAGCTGATAGATACAACAGCTATAAACAACCCTCTTGGCAATAG 4821 0.4499 MHVSGGEEWKQRRHMWPVPATATTVAPAADSSSSEFICKDGREIRVGDCALFKPPQDSPPFIGIIRKLTLKKEESPSLEVNWLYRPADLKLAKGIQLEAAPNEVFYSFHKDETPAASLLHPCKVAFLRKGVELPSGISAFVCRRVYDIESERLWWLTDKDYINERQEEVDQLLDKTRLEMHGAVQSGGRSPKPLNGPTPTPSLKSGSDSVQNSSSFGSQGKGKKRERGDQGSDSSKRERLIKTEDGDTGQHRPENMLKSELAKITENGGLVDFEGVEKLVQLMQPDSADKKIDLTGRIMLADVIAVTDRFDCLGWFVQLRGLPVLDEWLQEVHKGKIGDGNAPKESDKPVEELLLALLRALDKLPVNLHALQTCNVGKSVNHLRTHKNSEIQKKARSLVDTWKKRVEAEMNISDSKSGSSRGVSWPAKPASSEVSHVGSRKTGGSAEVAAKSSTMLMSASKNSQAKISPGESVSKLSPSSTSTKVTTTLVACNSKEQNFKAGAGTSDSPLTPIKEERSSSSSQSQNNSLSCSSEQAKTVGSCREDARSSTAVSMSASKILGGASRPRKSSNGLHGSALTAVQKEPHSGKNLSRNSASEKVSPNQPAHEKSHDVPLPDHGTNQRLIVRLPNTGRSPARGASGGCEDPAILPGKASPPGDKHENVDRRVKSKTDGSQINVLNMATDVCDASEAVADYEEGNDSPTGEGCRASEDGDKVTEISKPTSSSGFLSRSGQTYDASLSSINALIDSCVKFSEANPCVSPVDDAGMNLLATVAAGEISRSENVTPAVSPVRKSPAADESCSGNDSKLEHSGEAAVCALEHLKSGATIDHVNTVDPKHDLRHTVGSKSCDMSGDGETTQSGCKEKTIDGKIQTNSSPTDLSHNVEGPFSGPEIKEEASETILPSENENAAEPEGASPPHEQRKLETQAKSSNNSDSKRKTRASSDEDRKVDHVNERKMDNEVSVCEGPHVSLKIEKEVCEKSPESSTGLGNENQISGDKVAGGIISVQKPTPLVENNEYSEGRNENVVVSPSAPSHPMMESKVVSAVDVKPCEVEHSKERQRDLDSSGPAVNKQYTAENLDRKEVIGLGIDSSVQSESPKITVQENEVPKKSSGFNLDRVVSDGAAEQHASGSLIARESDITVKLDFDLNEGFPVDDVNQGDAVRQEEPIPSSAVHVPCPLPFPISSMSGGFHAAITVASAAKGPVIPPENPLRSKGELRWKGATSAFRPAEPRKNTEQPLNTSDSATKQGRAPLDFDLNVPDQRCFEDVASHGSSETCLESLPRERGIAGLDLDLNRVDETPDCGYFSVSKLDIPSLPTKPSLSGGLSSGGNVSRDFDLNNGPGLDEVGTDAPARSQQIKSTVPLPSIVHGVRTNSADYGNYSSWFPSGTSYPAINVPPLLPGRGEQSFVNGPGAQRILGPPGSTPFGPEIYRGAVLSSSPAVAYPSSTPFQYPGFPFETNFPLSSNSFSGCSTPFMDSSTAGGLCFPTMPSQLVGPGGVVSSNFPRPYVMSLPGGTSNVIPESRKWGGQSLDLNSGPGGADTERRDDRLPSGLRQPPVPSSQALMEEQMKMFQVAGGVLKRKEPDGGWDGADRYNSYKQPSWQ 1606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0476 1606 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 311 420 IPR035441 -
Mibi02g0476 1606 MobiDBLite consensus disorder prediction 1525 1606 - -
Mibi02g0476 1606 MobiDBLite consensus disorder prediction 499 557 - -
Mibi02g0476 1606 MobiDBLite consensus disorder prediction 917 956 - -
Mibi02g0476 1606 MobiDBLite consensus disorder prediction 851 884 - -
Mibi02g0476 1606 MobiDBLite consensus disorder prediction 499 671 - -
Mibi02g0476 1606 CDD TFIIS_I 362 407 - -
Mibi02g0476 1606 MobiDBLite consensus disorder prediction 1237 1251 - -
Mibi02g0476 1606 MobiDBLite consensus disorder prediction 412 426 - -
Mibi02g0476 1606 MobiDBLite consensus disorder prediction 569 603 - -
Mibi02g0476 1606 MobiDBLite consensus disorder prediction 1016 1039 - -
Mibi02g0476 1606 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1606 - -
Mibi02g0476 1606 MobiDBLite consensus disorder prediction 834 956 - -
Mibi02g0476 1606 MobiDBLite consensus disorder prediction 199 219 - -
Mibi02g0476 1606 SMART TFS2_5 329 408 IPR003617 GO:0005634
Mibi02g0476 1606 MobiDBLite consensus disorder prediction 181 254 - -
Mibi02g0476 1606 MobiDBLite consensus disorder prediction 657 671 - -
Mibi02g0476 1606 ProSiteProfiles TFIIS N-terminal domain profile. 323 409 IPR017923 -
Mibi02g0476 1606 MobiDBLite consensus disorder prediction 695 732 - -
Mibi02g0476 1606 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 274 410 IPR035441 -
Mibi02g0476 1606 MobiDBLite consensus disorder prediction 446 483 - -
Mibi02g0476 1606 MobiDBLite consensus disorder prediction 1226 1258 - -
Mibi02g0476 1606 MobiDBLite consensus disorder prediction 220 254 - -
Mibi02g0476 1606 MobiDBLite consensus disorder prediction 785 808 - -
Mibi02g0476 1606 Pfam BAH domain 44 151 IPR001025 GO:0003682
Mibi02g0476 1606 MobiDBLite consensus disorder prediction 1324 1357 - -
Mibi02g0476 1606 SMART BAH_4 42 157 IPR001025 GO:0003682
Mibi02g0476 1606 MobiDBLite consensus disorder prediction 1016 1032 - -
Mibi02g0476 1606 Pfam TFIIS helical bundle-like domain 357 406 IPR017923 -
Mibi02g0476 1606 Gene3D - 26 267 IPR043151 -
Mibi02g0476 1606 ProSiteProfiles BAH domain profile. 42 157 IPR001025 GO:0003682
Mibi02g0476 1606 MobiDBLite consensus disorder prediction 411 483 - -
Mibi02g0476 1606 MobiDBLite consensus disorder prediction 1324 1338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0476 Mibi-ChrMibi02 4651412 4657490 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Mibi02g0476 BAH 9.3e-11 No_clan