Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0444 ATGAAATTCTGCAAGACGTACCAGGAGTACATGCAAGGGCAGGAGAATAAATTACCTGCCGTTGGCTTCAAGAAACTCAAAAAGATCTTGAAGAATTGCAGAGTAGATTATCAACCCCAAAATCAGAATGCCCTCATCGATGAAGCCCACGCAAACAACGTCCGGACATGCCCTGATCGGTGCCCAGTGTGCGATGGGTCTTTCTTCCCTTCACTTCTCAATGAAGTGTCAGAAATAGTAGGCTGCTTTAATAAGCGAGCGCATAAATTGTTAGACCTACATCTTGCTTCTGGCTTCAAAAAGTACTTGTTTTGGATCAAAGGAAAATTGAGAGGAAACCACACCGTTCTCATTCAGGAAGGCAGAGATCTTGTTACCTATGCACTGATCAATGCAGTTGCTATTAGAAAAATACTCAAGAAATATGACAAGGTTCATTATTCGAAGCAAGGCCAATTGTTCAAGTCTCAAGTCCAGAGCATGCATATGGAAATTCTTCAGAGTCCTTGGTTTTGTGAGCTGATGGCCTTGCACATCAATTTAAGGGAAACCAAGCCCCAGTCCAGGCATGCAGCTGTGTTGTTTGATGGATGCTCTCTTACATTCAAGGATGGAAAACCATCAATCACTTGTGAGCTCTTTGATTCAATCAAACTTGACATCGACTTGACTTGTTCTATATGCCTGGATACAGTATTTGATCCAGTTTCTCTTACTTGTGGCCACCTATTCTGCTACATGTGTGCTTGCTCGGCTGCGTCAGTCACTATTGTTAATGGACTCAAGTTAGCAAATCCTAAAGCAAAATGTCCTCTATGCCGAGAGAGTGGAGTTTACGAAGGTGCTATCCACTTGGAAGAATTGAACATTCTGTTAGGGCGAAGGTGTCAAGAATACTGGGAAGAAAGACTTCAGGCGGAGAGGGCAGAGAGGCTTAAGCAGATAAAGGAGCATTGGGAATCAGAGTGCAGGGCTGTATTGGGTGTCTAA 990 0.4343 MKFCKTYQEYMQGQENKLPAVGFKKLKKILKNCRVDYQPQNQNALIDEAHANNVRTCPDRCPVCDGSFFPSLLNEVSEIVGCFNKRAHKLLDLHLASGFKKYLFWIKGKLRGNHTVLIQEGRDLVTYALINAVAIRKILKKYDKVHYSKQGQLFKSQVQSMHMEILQSPWFCELMALHINLRETKPQSRHAAVLFDGCSLTFKDGKPSITCELFDSIKLDIDLTCSICLDTVFDPVSLTCGHLFCYMCACSAASVTIVNGLKLANPKAKCPLCRESGVYEGAIHLEELNILLGRRCQEYWEERLQAERAERLKQIKEHWESECRAVLGV 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0444 329 Pfam Zinc finger, C3HC4 type (RING finger) 222 275 - -
Mibi02g0444 329 ProSiteProfiles SPX domain profile. 1 156 IPR004331 -
Mibi02g0444 329 SUPERFAMILY RING/U-box 218 277 - -
Mibi02g0444 329 ProSiteProfiles Zinc finger RING-type profile. 225 274 IPR001841 -
Mibi02g0444 329 SMART ring_2 225 273 IPR001841 -
Mibi02g0444 329 ProSitePatterns Zinc finger RING-type signature. 240 249 IPR017907 -
Mibi02g0444 329 CDD SPX_BAH1-like 2 152 - -
Mibi02g0444 329 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 212 327 IPR013083 -
Mibi02g0444 329 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 1 328 IPR033326 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0444 Mibi-ChrMibi02 4390077 4392209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0444 222 283 C3H Transcription Factor Family AT4G28270 40.299 1.79e-06 46.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g0444 02 4390077 4392209 Mibi02g0444 02 4390077 4392209 ECH