Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0422 ATGAGAATGCTTGCTTCTGATGGCTGCCTTCTCCTCTTAATGTTAGTCCTCCTCATTTTCCTTCACCAAGCTTACTCCTCCTTATGCCTGCGGCGGCGCCACCATGATGACGGCGGTGCCCCATGTCTCTTGATTTCTGTTTCCACAACCACCTCTCCCACCGCCCAGAGCAAGGATCTATACCCTTCTCTTCTCAGGCACCTTCCCACTTTGACCTTCTCTTCCACCATTCAACCTCCGTTGAATGACTGTGCCATCTGCTTATCGGAGTTGCAAGACGGCGATGAAGGTCGTGTCCTACCAAATTGCAACCACAGTTTTCACTCTCATTGTATTGATGAGTGGTTTCGTGCTCACTCCATCTGCCCCATGTGTCGGTCCCTCGTTAGGCCTTCCAAAATTTTGAAGCAAAACTCTGTTTCGCTGGATAAATTTGTGCTTTGTTCACATCTTCCTCCGGCGATTAGGTGTCCTAAGCAGCCATTCAAGGTGATGGAGGAGAAGACAAGCATAGTCATAGAGACAAGAGATGATTAA 537 0.486 MRMLASDGCLLLLMLVLLIFLHQAYSSLCLRRRHHDDGGAPCLLISVSTTTSPTAQSKDLYPSLLRHLPTLTFSSTIQPPLNDCAICLSELQDGDEGRVLPNCNHSFHSHCIDEWFRAHSICPMCRSLVRPSKILKQNSVSLDKFVLCSHLPPAIRCPKQPFKVMEEKTSIVIETRDD 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0422 178 SUPERFAMILY RING/U-box 64 132 - -
Mibi02g0422 178 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 47 131 IPR013083 -
Mibi02g0422 178 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 11 138 - -
Mibi02g0422 178 SMART ring_2 84 125 IPR001841 -
Mibi02g0422 178 ProSiteProfiles Zinc finger RING-type profile. 84 126 IPR001841 -
Mibi02g0422 178 Pfam Ring finger domain 82 126 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0422 Mibi-ChrMibi02 4228976 4229512 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0422 51 131 Rapid Response to Elicitors AT4G15975 48.148 1.56e-24 94.0