Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0420 ATGGATGTGGATGTGGATATGGAGACTCACAGTAACAAGTATGCCCACAATGGTAAGCTCCTCCTTGGCTCTGCCACTCTTGTCTTCTTCATGCTCATCTTCCTCTTCTTCCTCCACACCTACTCTTCCTCCTGCTTCCGCCGCCGCAATCGAAGCCTCTCTCCGACCGCCACCGCCGACCCTCACACAGCCCTTGACCCTTCTCTCTTCAAATTCCTCCCAACCTTCACATACTCCTCCGCCACTCACCTCCACCTCCAACAATGTGCCGTCTGCTTATCAGAGTTCGAAGAAGACGACGACGGTCGCCTCCTCCCATATTGCAATCACTGTTTCCATACTCATTGCATCGATACATGGTTCCGATCTCACTCCAACTGTCCCATATGCCGAGCTCTGGTTCAACCCCCCCAAAAAACAGAGGCGGCTGTTCCCGGTGGAGATTTCGCCGGTTGCTCGTATCTTCCTCCGCCTATTTCATGCCCTAGGAAGGAATTGGATTTAGATATGGTGACGGTGATAGTGGAGGCGACTAAGGACGAAATGCGTGACAATACGAGGCATTCGGCCGGTGACTCCCGGCTGAAATGTTCCCATGGTGGACTCTCGGAGTTGGGGCCCGACCCGGCCCAACTAGCCCAGGGACGAAAGTGGCCTTTTCATTGTTGA 669 0.5381 MDVDVDMETHSNKYAHNGKLLLGSATLVFFMLIFLFFLHTYSSSCFRRRNRSLSPTATADPHTALDPSLFKFLPTFTYSSATHLHLQQCAVCLSEFEEDDDGRLLPYCNHCFHTHCIDTWFRSHSNCPICRALVQPPQKTEAAVPGGDFAGCSYLPPPISCPRKELDLDMVTVIVEATKDEMRDNTRHSAGDSRLKCSHGGLSELGPDPAQLAQGRKWPFHC 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0420 222 SMART ring_2 89 130 IPR001841 -
Mibi02g0420 222 CDD RING-H2_EL5_like 88 131 - -
Mibi02g0420 222 ProSiteProfiles Zinc finger RING-type profile. 89 131 IPR001841 -
Mibi02g0420 222 Pfam Ring finger domain 88 131 IPR001841 -
Mibi02g0420 222 SUPERFAMILY RING/U-box 73 137 - -
Mibi02g0420 222 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 9 135 IPR044675 -
Mibi02g0420 222 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 54 137 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0420 Mibi-ChrMibi02 4222764 4223432 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0420 11 135 Rapid Response to Elicitors AT3G16720 44.138 2.97e-34 122