Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0418 ATGGCTTTCAAGCTAAGCACCCTCTCAACAACAACAGTATTCCTTCTTCTCATTCCCTTGTTCATCTCCTCATCATTTGCAGACATTTCTCCTTCAACTCCTGTCAGCGCAGGAACTGCATGTAGTTCCACACCCGACCCTTCATACTGCAAATCCGTTCTTCCTCCCATCCAAAGAGGCAATGTCTACGACTATGGCCGTCTCTCCGTCAGCAAATCCTTATCACAATCCCGTAAATTCCTCACCCTCGTCAACAAATATCTCCAGCGACGATCTTCTTTATCCGCCGCCGCCTTCAGGGCCCTCCAAGATTGCCAAACTCTAGGGGAACTCAACTACGATTTCCTCTCAAATTCGTTTCAAACTGTGAACAAAACCACAAGGCTTCTTCCCAGTTTACAAGCTGACGATATCCAAACTCTTCTAAGTGCCATCTTAACTAACCAACAAACCTGCCTTGATGGCCTTAAAGACACCGCTTCCGCTTGGAGCGTTAAGAACGGACTCTCCATTCCGCTTTCTAACGATACCAAACTGTACAGTGTGTCTCTGGCTCTTTTCACGAAAGGCTGGGTTCCAAATTCCAAGAAAAAAACGACGGCGTATCAGCCAAACAAGAAACAGCTCGCCTTCGGAAACGGGCGTTTGCCGCTGAAGATGTCAAACAGGAATTTGGCCATATACAGGTCAGTGAGTCAGAGGAAAATGCTTCAGACGGCCACAGTGGGTGGTGATGTGGTTGTTGTGAACAACGTTGTCACGGTGAGACAGGACGGAACTGGAAACTTCACCACCATCAATGACGCCATTGCTGCAGCTCCCAACAAGTCTTCCTCCGCTAGCGGCTATTTCATGATCTACGTCAGCGCAGGTGTGTATGAAGAATACGTCAACATCGATAAGAAGAAGACATACTTGATGATGGTTGGAGATGGCATCAACAAGACTATCATCACTGGTAACAGAAGTGTCGTTGACGGCTGGACCACCTTCAACTCCGCGACATTCGCTGTTGTAGGAGAAGGATTTGTAGGGGTAAACATGACAATTCGTAACACAGCGGGGCCAGAGAAGCACCAAGCAGTTGCGGTTAGAAACGGGGCGGATTTATCCGCGTTTTACAGTTGCAGTTTTGAGGGATATCAAGACACGTTATATGCTCATTCTCTGAGGCAGTTCTACAGAGAATGTGACGTATATGGCACCGTGGATTTCATATTTGGGAACGCGGCCATGGTGCTCCAAAACTGCAATCTCTATCCTCGTTTACCAATGAGCGGACAATTCAATGCCATCACAGCACAGGGTCGAACCGACCCGAATCAGAACACGGGCATTTCGATCCATAATTGCACAATTAGAGCCACTGATGACTTGGCTGCGGCCAATGGTACGGTGAGCACGTACCTAGGGAGGCCATGGAAGGCGTATTCGAGGACGGTTTATATGGAGAGCTTCATGGATAGTGTGATAGCAAGTGCAGGGTGGCAGAAATGGGATGGTGATTTTGCTTTGAGCACTCTGTATTATGCAGAGTACAATAACAGTGGGCCTGGATCGAGTACGGCCGATAGGGTGACGTGGCCTGGCTACCATGTTATTAATGGCACCGATGCTGCTAATTTCACGGTGGCCAACTTCTTGCTCGGAGATGACTGGTTGCCTCGCACTGGGGTCACTTACACCAGCACCTTGATATAA 1701 0.4838 MAFKLSTLSTTTVFLLLIPLFISSSFADISPSTPVSAGTACSSTPDPSYCKSVLPPIQRGNVYDYGRLSVSKSLSQSRKFLTLVNKYLQRRSSLSAAAFRALQDCQTLGELNYDFLSNSFQTVNKTTRLLPSLQADDIQTLLSAILTNQQTCLDGLKDTASAWSVKNGLSIPLSNDTKLYSVSLALFTKGWVPNSKKKTTAYQPNKKQLAFGNGRLPLKMSNRNLAIYRSVSQRKMLQTATVGGDVVVVNNVVTVRQDGTGNFTTINDAIAAAPNKSSSASGYFMIYVSAGVYEEYVNIDKKKTYLMMVGDGINKTIITGNRSVVDGWTTFNSATFAVVGEGFVGVNMTIRNTAGPEKHQAVAVRNGADLSAFYSCSFEGYQDTLYAHSLRQFYRECDVYGTVDFIFGNAAMVLQNCNLYPRLPMSGQFNAITAQGRTDPNQNTGISIHNCTIRATDDLAAANGTVSTYLGRPWKAYSRTVYMESFMDSVIASAGWQKWDGDFALSTLYYAEYNNSGPGSSTADRVTWPGYHVINGTDAANFTVANFLLGDDWLPRTGVTYTSTLI 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0418 566 FunFam Pectinesterase 38 189 - -
Mibi02g0418 566 FunFam Pectinesterase 246 565 - -
Mibi02g0418 566 ProSitePatterns Pectinesterase signature 2. 399 408 IPR033131 -
Mibi02g0418 566 Gene3D - 246 565 IPR012334 -
Mibi02g0418 566 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 189 IPR035513 -
Mibi02g0418 566 SMART PMEI_2 30 186 IPR006501 GO:0004857
Mibi02g0418 566 Pfam Pectinesterase 253 551 IPR000070 GO:0030599|GO:0042545
Mibi02g0418 566 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 189 IPR035513 -
Mibi02g0418 566 Pfam Plant invertase/pectin methylesterase inhibitor 39 186 IPR006501 GO:0004857
Mibi02g0418 566 SUPERFAMILY Pectin lyase-like 248 564 IPR011050 -
Mibi02g0418 566 PANTHER PECTINESTERASE 21 555 - -
Mibi02g0418 566 CDD PMEI-like_3 39 191 - -
Mibi02g0418 566 TIGRFAM PME_inhib: pectinesterase inhibitor domain 12 187 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0418 Mibi-ChrMibi02 4216725 4218525 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0418 12 566 Carbohydrate Esterase AT4G02330 62.982 0.0 730