Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0417 ATGGCCTTCAAGCTCTTTCCCTGTCTTGCCCTCTCATTCTTTTACTTTTACCTATTCCTTATCTTGTATGTGTCGCCATCTACAGCAGCACCCCATCAGAAACAGCATGGAAAAGCTTATGGTCCTCCAGCTCATGGTCATCCAGGAACCACCTGCGACCCCAAAAAGAACCCTTCTTATTGCAAACATAATGTTCCTGCTCCTCAAAAAGGCAAGAACAAGAACATCTATGACCATGGACGTAACTCCTTTAAAAAATCCTTATCCCAATCCCACAAGTTTCTCAACTTAGTCGACTCCTACCTTCAATCTCCATCCTATTATTCTCAATCCACAATTCGAGCTCTTCAAGATTGCCAACTCCTCTCTCAAGTCACCTATGAATACTTCTCAACCTGCTACCACACTGTCAACCAATCCAGCTATGTTCTTCCCTATTCTCAAGCCGAATATCTTCAATCCATGCTAAGTGCCATAATCACTAACCAAATCACTTGTTTGGATGGCCTTCAGACTACGGCTTCTGATCCAAAAGTGAAGGACGATCTCTCTGTCCCACTCTTGAACGACACTAACCTTCACAGTGCATCCCTTGCTCTGTTCGTCGAGGGTTGGGTCCCTCCAAAGAAAAACAAGCCATCATCTTCACACAAAGGTGGAAGAAATTTAGGTTTCCAGAAAGGACGTTTGCCGATGAAGATGTCAAAGCCAGCACGTAACGTATACGAGCATGCCAAAAGACATGGCAGAAAGTTGCTTCAGACTCTCACTGACATAACAAGCGTCAACATAAGGGACATTGTGGTAGTAAGTCAGGACGGAAGCGGAAACTTCACCACCATCAACGACGCCATAGCCGCAGCCCCAAATAAAACCTCTGCCGATGGAGGCTATTTCTTGGTTTTCGTCTCGGAGGGAGTGTATGAAGAAAACGTAAACATAGACAAAAACAAAAGGAACTTGATGATTCTGGGAGACGGAATCAATCGCACAGTCATCACCGGCAATCGCAGTGTCGCAGATGGGTGGACAACATTCGATTCAGCGACAGTCGCTGTGGTAGGAATGGGCTTCGTGGGAGTGAACATAACAGTGAGAAACACGGCGGGGCCAAGCAAAAGGCAAGCAGTGGCACTAAGAAGTGGAGCAGACATGTCTGTTTTCTATAGCTGCAGTTTCGAGGGATACCAAGACACTCTGTACACACATTCTATGAGGCAATTTTACAGAGAATGTGACATATATGGAACGGTGGACTTCATATTCGGCAATGCAGCTGTTGTATTACAAAACTGCAACATATATCCACGCTTGCCCATGAGTGGACAATTCAATGCGATCACAGCACAAGGTCGAACTGACCCGAATCAGAACACAGGAATTTCCATACAAAACGCCACTATACAAGCTGCTGATGATCTTATGAGCGCTCTACAGAGTGGTACGGTGGTGAAGACTTATTTGGGAAGGCCATGGAAGCAGTATTCAAGGACGATTTACTTGCAGAGTTTCATGGACAATTTGATAGATAGTTTGGGTTGGAGGGAATGGGATGGGAATTTTGCTTTGGATACATTGTACTATGCAGAGTTTGGAAACAGGGGACCTAGCGCCGGCACCGGAAACAGAGTAAATTGGCCTGGTTTCCATTTGATTAATGCGACGGACGCCGATAATTTCACGGCCGCTAATTTCCTGCAAGCCGATGCTTGGGTGGTTCGCACAGGCATCCCTTTCCTTACTGGTTTGATTTAG 1755 0.457 MAFKLFPCLALSFFYFYLFLILYVSPSTAAPHQKQHGKAYGPPAHGHPGTTCDPKKNPSYCKHNVPAPQKGKNKNIYDHGRNSFKKSLSQSHKFLNLVDSYLQSPSYYSQSTIRALQDCQLLSQVTYEYFSTCYHTVNQSSYVLPYSQAEYLQSMLSAIITNQITCLDGLQTTASDPKVKDDLSVPLLNDTNLHSASLALFVEGWVPPKKNKPSSSHKGGRNLGFQKGRLPMKMSKPARNVYEHAKRHGRKLLQTLTDITSVNIRDIVVVSQDGSGNFTTINDAIAAAPNKTSADGGYFLVFVSEGVYEENVNIDKNKRNLMILGDGINRTVITGNRSVADGWTTFDSATVAVVGMGFVGVNITVRNTAGPSKRQAVALRSGADMSVFYSCSFEGYQDTLYTHSMRQFYRECDIYGTVDFIFGNAAVVLQNCNIYPRLPMSGQFNAITAQGRTDPNQNTGISIQNATIQAADDLMSALQSGTVVKTYLGRPWKQYSRTIYLQSFMDNLIDSLGWREWDGNFALDTLYYAEFGNRGPSAGTGNRVNWPGFHLINATDADNFTAANFLQADAWVVRTGIPFLTGLI 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0417 584 Pfam Plant invertase/pectin methylesterase inhibitor 50 187 IPR006501 GO:0004857
Mibi02g0417 584 SMART PMEI_2 43 200 IPR006501 GO:0004857
Mibi02g0417 584 CDD PMEI-like_3 50 201 - -
Mibi02g0417 584 MobiDBLite consensus disorder prediction 209 228 - -
Mibi02g0417 584 SUPERFAMILY Pectin lyase-like 266 582 IPR011050 -
Mibi02g0417 584 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 50 201 IPR035513 -
Mibi02g0417 584 ProSitePatterns Pectinesterase signature 2. 414 423 IPR033131 -
Mibi02g0417 584 FunFam Pectinesterase 261 583 - -
Mibi02g0417 584 PANTHER PECTINESTERASE 49 572 - -
Mibi02g0417 584 Pfam Pectinesterase 268 569 IPR000070 GO:0030599|GO:0042545
Mibi02g0417 584 Gene3D - 261 583 IPR012334 -
Mibi02g0417 584 Gene3D Invertase/pectin methylesterase inhibitor family protein 49 203 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0417 Mibi-ChrMibi02 4205823 4208504 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0417 9 584 Carbohydrate Esterase AT4G02330 53.378 0.0 641