Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0415 ATGTATAACCTCCCCGCGAGAACAGCTTTTTCTCTCCCTCTTTTGCTTCTTCTCTCTTTACTCTCTGTGCTTCACTTTTGTCCATCCCACAATGGCAGCCTCTCAAAAACACGCCTCCATTTACAAACACACCTGCAAGTAGCCCACACCACATGCCAAGGAACACTCTACCCACAACTCTGCGTTTCAACCCTTTCTTCCATTCCCAATCTTCCCACCAAATCTGTCCCACAAATCATCTCCTCTGTGATCAGTCACACAGTGTCCGAGGTGAAATCCTCGTCCCATAACTGCAATGGCCTCCGAAACAACCTCACAAACCTCAACCCACTCGAACAGAGAGCCCTCGAAGATTGTCTCAAACTGTTTGATGACACTGTCTACGAGCTCGACGCCACCATGGCTGATCTCTCCGGCGCCGGAATAAGCTTCAAGCGTTACCATGACTTGCAGACTCTGCTAAGTGGGGCAATGACGAACCTGTACACGTGTCTTGATGGGTTTGCGTATAGCCGAGGTAATGTGAGAGATAGGATAGAGGACAGGCTGTTTGAGATCTCGCGTCATGTTAGTAACTCACTGGCCATGCTCAAGAACGTGCCTGGACTGAAGAAAGCTTCCGAGTCTCATCAGATCTTGCCGGAGTACGGTAAAGTGAAAAATGGGTACCCTTCGTGGTTGTACTCCAGAGAAAGAAATCTCCTGGAAGCTAATGTGAATGAGACAAGGTTTGATCTTGTGGTTGCAAAAGATGGCACTGGCAATTTCACTACAATTGGGGAGGCTGTGAATGCAGCTCCCAATTCCAGCACTACCAGGATTGTGATACACATAAAAGCAGGGGCGTACTTTGAGAATGTAGAGGTGATTAGGAAAAAGACCAATTTGATGTTCGTTGGGGATGGAATTGGGAGGACGGTCGTGAAAGGCAGTAGGAATGTCGTCGACGGATGGACAACTTTTCAATCGGCCACCGTAGCGGTGGCGGGAACGGGATTCATAGCGAAGGGCGTGACGTTCGAGAACTCAGCCGGAGCCATCAAACACCAAGCCGTGGCTCTGAGAAACAGCGCCGACCTATCCGCCTTCTACAAATGCAGCTTTGTTGGCTACCAAGACACTCTCTACGTTCATTCACTCCGACAATTCTACAGAGATTGCAACATTTACGGCACCGTAGATTTCATCTTCGGAAACGCCGCCGCACTCTTCCAGAACTGCAATCTATACGCTCGCAAGCCACTCCAGAATCAGAAGAACATGTTCACCGCTCAGGGAAGAGATGATCCTAATCAGATCACAGGCATTTCCATCTTGAACTGCAAAATCGCCGCAGCTGAGGATTTAATTGCCGTTAAGTCCTCCTTCAAGACATACTTGGGACGCCCATGGAAACCGTATTCGAGGACGGTGATAATGAAATCTTACGTGGAGGATGTGATTGAGGGTGATGGGTGGTTGGAATGGAACGGAACTTTGGGCCTGGACACTTTGTATTATAGGGAGTACTTGAATAGTGGGCCTGGTTCTAATACCAGCGCCAGAGTCACATGGCCTGGTTTCGGGGTAATCAACTCCTCCAGCGAGGCTTCTCAGTTCACCGCCGCACGGTTTATTCAGGGATATGACTGGCTTAATTCCACCGCCATTCCCTTTTACCTTGACTTCAGCTGA 1674 0.491 MYNLPARTAFSLPLLLLLSLLSVLHFCPSHNGSLSKTRLHLQTHLQVAHTTCQGTLYPQLCVSTLSSIPNLPTKSVPQIISSVISHTVSEVKSSSHNCNGLRNNLTNLNPLEQRALEDCLKLFDDTVYELDATMADLSGAGISFKRYHDLQTLLSGAMTNLYTCLDGFAYSRGNVRDRIEDRLFEISRHVSNSLAMLKNVPGLKKASESHQILPEYGKVKNGYPSWLYSRERNLLEANVNETRFDLVVAKDGTGNFTTIGEAVNAAPNSSTTRIVIHIKAGAYFENVEVIRKKTNLMFVGDGIGRTVVKGSRNVVDGWTTFQSATVAVAGTGFIAKGVTFENSAGAIKHQAVALRNSADLSAFYKCSFVGYQDTLYVHSLRQFYRDCNIYGTVDFIFGNAAALFQNCNLYARKPLQNQKNMFTAQGRDDPNQITGISILNCKIAAAEDLIAVKSSFKTYLGRPWKPYSRTVIMKSYVEDVIEGDGWLEWNGTLGLDTLYYREYLNSGPGSNTSARVTWPGFGVINSSSEASQFTAARFIQGYDWLNSTAIPFYLDFS 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0415 557 FunFam Pectinesterase 239 556 - -
Mibi02g0415 557 SMART PMEI_2 43 196 IPR006501 GO:0004857
Mibi02g0415 557 CDD PMEI-like_3 50 202 - -
Mibi02g0415 557 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 49 200 IPR035513 -
Mibi02g0415 557 PANTHER PECTINESTERASE 25 546 - -
Mibi02g0415 557 Gene3D - 240 556 IPR012334 -
Mibi02g0415 557 Pfam Plant invertase/pectin methylesterase inhibitor 49 196 IPR006501 GO:0004857
Mibi02g0415 557 TIGRFAM PME_inhib: pectinesterase inhibitor domain 17 199 IPR006501 GO:0004857
Mibi02g0415 557 Pfam Pectinesterase 245 541 IPR000070 GO:0030599|GO:0042545
Mibi02g0415 557 ProSitePatterns Pectinesterase signature 2. 389 398 IPR033131 -
Mibi02g0415 557 Gene3D Invertase/pectin methylesterase inhibitor family protein 47 201 IPR035513 -
Mibi02g0415 557 SUPERFAMILY Pectin lyase-like 244 554 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0415 Mibi-ChrMibi02 4191751 4195634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0415 73 556 Carbohydrate Esterase AT4G02320 53.106 0.0 537