Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0410 ATGTCTACAGTTTTGTTAATACATTATGCGTGTAGCCTTTCTTCCCACACCACTAAGGCCGCAGGGTGGGAGGGGAAAATGGTTTCTCTGAAACTGCAGAAGCGTCTCGCCGCCAGTGTGCTCAAGTGCGGCAGAGGCAAAGTTTGGCTCGACCCTAATGAAGTCAACGAAATATCCATGGCCAATTCTCGCCAAAACATAAGGAAGTTGGTCAAGGATGGTTTCATCATTCGGAAGCCAACTAAGATTCACTCCCGTTCACGTGCCCGTCGAATGAAGGAGGCCAAGAGGAAGGGACGTCACTCTGGCTATGGTAAGCGAAAGGGTACCAGAGAGGCACGACTTCCTACAAAAATTCTTTGGATGAGGAGAATGCGTGTGCTCAGACGCTTGCTCCGGAAGTACAGGGAATCAAAGAAAATTGACAAGCATATGTATCATGACATGTACATGAAAGTGAAGGGTAATGTGTTCAAGAATAAAAGAGTCTTAATGGAGAGCATTCACAAATCTAAGGCTGAGAAGGCTAGAGAGAAGACTTTGAGTGATCAGTTTGAGGCCAAGCGTGCGAAGAACAAGGCAAGCCGGGAAAGGAAAATCGCAAGGAGGGAGGAGCGTTTGGCTCAAGGTCCAGGAGAAAAAGCTGTTCCCGCACCAGCTGCACCACCTGTAACAGCATCTCAGCCAGCCCAAGCATCCAAAAAATCCAAGAAGTGA 717 0.4798 MSTVLLIHYACSLSSHTTKAAGWEGKMVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREERLAQGPGEKAVPAPAAPPVTASQPAQASKKSKK 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0410 238 Pfam Ribosomal protein L19e 30 171 IPR000196 GO:0003735|GO:0005840|GO:0006412
Mibi02g0410 238 MobiDBLite consensus disorder prediction 83 111 - -
Mibi02g0410 238 Gene3D - 28 82 IPR015972 GO:0003735|GO:0005840|GO:0006412
Mibi02g0410 238 Gene3D - 83 214 - -
Mibi02g0410 238 ProSitePatterns Ribosomal protein L19e signature. 33 52 IPR023638 -
Mibi02g0410 238 SMART Ribosomal_L19e_2 29 172 IPR000196 GO:0003735|GO:0005840|GO:0006412
Mibi02g0410 238 MobiDBLite consensus disorder prediction 170 210 - -
Mibi02g0410 238 SUPERFAMILY Ribosomal protein L19 (L19e) 29 170 IPR035970 GO:0003735|GO:0005840|GO:0006412
Mibi02g0410 238 PANTHER 60S RIBOSOMAL PROTEIN L19 27 214 IPR039547 GO:0003723|GO:0003735|GO:0022625
Mibi02g0410 238 Hamap 50S ribosomal protein L19e [rpl19e]. 29 175 IPR000196 GO:0003735|GO:0005840|GO:0006412
Mibi02g0410 238 MobiDBLite consensus disorder prediction 83 105 - -
Mibi02g0410 238 FunFam Ribosomal protein L19 27 82 - -
Mibi02g0410 238 CDD Ribosomal_L19e_E 30 193 IPR033935 GO:0003735|GO:0022625
Mibi02g0410 238 FunFam Ribosomal protein L19 83 218 - -
Mibi02g0410 238 MobiDBLite consensus disorder prediction 170 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0410 Mibi-ChrMibi02 4116923 4119643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0410 27 238 Cytoplasmic Ribosomal Protein Gene Family AT3G16780 84.906 5.58e-128 358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g0410 02 4116923 4119643 Mibi02g0410 02 4116923 4119643 ECH