Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0406 ATGCAACATTTTATTCCCACATCCCACATTTTCAGTTGTTGCCTAAGTGACATAAATCATCGAGGCCTCCTGTTGTTAACCTTGAAGGCAACAACCTCTTCATTCTCCAGCCATATCAACTTGTACTTCCGGCCGGCCACCATGTCTGACGTTGTTGACCCTTACGCTGCTTGTTATTACTCTGTTCTTGGCATAAACAAGCAGGCCACCGATTGTGAAATCCGAGGCGCTTATCGTAAGATGGCTCTGAAATGGCATCCGGATAGGTGGTCGTGGATTAAGGACCCAGATCTTGTCATAGAAGCTAAAACACGGTTTCAGCAAATTCAAGAGGCTTATTCGGTCTTGTCAAATAAAGGGGAGAGAACCATATATGATGCTGGATTGTTTGGTCTGACTGGAGATGATGACGATGAGGGATTTGTTGATTTCATGCAAGAAATGGTCTTGATGACGCATACAGAGAACCCCCAGGAATACACGTTGGAGGATCTTGAGAGACTGCTAATGGACATGATGGAAGACCACAGTGAAGGAACGGCGAAATCTGAGTTTCAAGCCACCACCACTCCCTCAAAAAAGATTCGTACCAAATGA 597 0.4506 MQHFIPTSHIFSCCLSDINHRGLLLLTLKATTSSFSSHINLYFRPATMSDVVDPYAACYYSVLGINKQATDCEIRGAYRKMALKWHPDRWSWIKDPDLVIEAKTRFQQIQEAYSVLSNKGERTIYDAGLFGLTGDDDDEGFVDFMQEMVLMTHTENPQEYTLEDLERLLMDMMEDHSEGTAKSEFQATTTPSKKIRTK 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0406 198 MobiDBLite consensus disorder prediction 176 198 - -
Mibi02g0406 198 Pfam DnaJ domain 59 126 IPR001623 -
Mibi02g0406 198 SMART dnaj_3 57 121 IPR001623 -
Mibi02g0406 198 MobiDBLite consensus disorder prediction 182 198 - -
Mibi02g0406 198 PANTHER PUTATIVE, EXPRESSED-RELATED 56 193 - -
Mibi02g0406 198 ProSitePatterns Nt-dnaJ domain signature. 106 125 IPR018253 -
Mibi02g0406 198 SUPERFAMILY Chaperone J-domain 58 148 IPR036869 -
Mibi02g0406 198 CDD DnaJ 58 118 IPR001623 -
Mibi02g0406 198 Gene3D DnaJ domain 46 132 IPR036869 -
Mibi02g0406 198 ProSiteProfiles dnaJ domain profile. 58 129 IPR001623 -
Mibi02g0406 198 PRINTS DnaJ domain signature 78 93 IPR001623 -
Mibi02g0406 198 PRINTS DnaJ domain signature 101 121 IPR001623 -
Mibi02g0406 198 PRINTS DnaJ domain signature 60 78 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0406 Mibi-ChrMibi02 4097860 4098831 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0406 58 127 C2H2 Transcription Factor Family AT1G74250 45.070 1.09e-11 61.2