Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0402 ATGGCCACCAGAAATCGAACTCTACTATTTAGAAAGCACAGAGATGCCATCAAAAGTGTGCGAGCCCCTTTATCTTCCTCAGCTTCTGGTTCTGGCGGTCCCGTTATTGAAATGGTCAGCACTTCCCTTCTTCGTTCCAATCAATCTTCATATGCTCCTCTAAGCACCGAAGATCCCGGCCCTTCCAGAGATGCGTTTACTGTGGGGTTGCCACCGGCTTGGGTAGATGACTCTGAAGAAATAGCTGCAAATATACAACGTGCTCGGACTAAAATGTCTGAACTAGTCAAACTTCATGCAAAGGCATTAATGCCCTCTTTTGGTGATGGTAAAGAAGATCAACAACGGATTGAGATTCTCACCCAAGAGATTACAACCCTCTTGAGAAAATCTGAGATGAAGCTCAAAAGACTTTCTACCACTGGTGGATCCTCTGAAGATTCAAACATTAGAAAAAATGTGCAGCGCTCCCTTGCTACAGACCTTCAGAACCTGTCAATGGACCTCAGGCGAAAGCAGTCACAATACTTGAAACGGTTGCGGCAGCAAAAGGAGGGATATGATGGGGTTGACTTGGAGATGAATGTGAATGGGTATAAATTTGGTTCACAGGATGATGGATTCAGTGATGTGGGTTTCAGTGATCATCAAATGGCAAAGCTAAAGAAGAGTGAGCAATTATCGGAGGAAAGGGAAAGAGAGATTGAACAGGTCACTAAATCAGTGAATGAACTGGCTCAGATCATGAAGGATCTCTCTGTTCTGGTGATAGACCAGGGAACAATTGTGGATAGAATTGACTACAACATTCAGAATGTTGCTACATCCGTTGAAGAGGGTTTTAAGCAGTTGGAGAAGGCTGAGAGAACACAGAAAAAAGGAGGAATGATTATGTGTGCAACTGTGCTTGTCATAATGTGCCTCGTCATGCTAGTCCTCTTGGTGCTCAAGGAGATATTGTTTTAG 966 0.4389 MATRNRTLLFRKHRDAIKSVRAPLSSSASGSGGPVIEMVSTSLLRSNQSSYAPLSTEDPGPSRDAFTVGLPPAWVDDSEEIAANIQRARTKMSELVKLHAKALMPSFGDGKEDQQRIEILTQEITTLLRKSEMKLKRLSTTGGSSEDSNIRKNVQRSLATDLQNLSMDLRRKQSQYLKRLRQQKEGYDGVDLEMNVNGYKFGSQDDGFSDVGFSDHQMAKLKKSEQLSEEREREIEQVTKSVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVATSVEEGFKQLEKAERTQKKGGMIMCATVLVIMCLVMLVLLVLKEILF 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0402 321 Gene3D - 71 279 - -
Mibi02g0402 321 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 225 287 IPR000727 -
Mibi02g0402 321 SMART SynN_4 65 181 IPR006011 GO:0016020
Mibi02g0402 321 CDD SNARE_syntaxin16 229 286 - -
Mibi02g0402 321 Coils Coil 221 241 - -
Mibi02g0402 321 Pfam SNARE domain 261 313 IPR000727 -
Mibi02g0402 321 PANTHER SYNTAXIN 77 307 IPR045242 -
Mibi02g0402 321 SMART tSNARE_6 220 287 IPR000727 -
Mibi02g0402 321 FunFam Syntaxin-43 71 279 - -
Mibi02g0402 321 SUPERFAMILY t-snare proteins 70 280 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0402 Mibi-ChrMibi02 4049369 4054116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0402 1 321 SNARE and Associated Proteins AT5G26980 70.948 1.37e-163 457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g0402 02 4049369 4054116 Mibi02g0402 02 4049369 4054116 ECH
Mibi02g0402 02 4049369 4054116 Mibi06g2737 06 47198876 47201971 ECH