Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0395 ATGTCTGATTATAGTAATAGCAGTGCACCAAAACTATTCGGTTTCCCACTGAGAGAGCAGGAAGAATTTAATGAACTAAGAAGAGATGAAATGGAAGATGAGAGGAAATTCAGGTGCCATTATTGCCAGAAAGCATTCACAAACTCACAAGCATTAGGGGGTCACCAAAATGCTCACAAGAGAGAGCGCCAAAGAGCCAGGCGTTTCCTTAGCCACCACACTGATCGCAGACGTTTCATACCACAACCACCGCTCATGGCGGCTGCCAACCACCACCGACCGCGTTTTCTTCCTAAATCCAATACATCAGCCCACTTCTCTTCCACGCCCATTTTCATTCCTTCGCCTTATACAACTACTTCTTCCAGGTTCCCTTTTCAGCTCCAATATGCTTCATCACCCTCTCTACAACAATCTTCCCCTTCTCATGTTGCTACTCTGCTTCCTCAGAAAGATCATGTGGGCGTTAATCTAAATTTGTCTCTCTCAGATTAG 495 0.4525 MSDYSNSSAPKLFGFPLREQEEFNELRRDEMEDERKFRCHYCQKAFTNSQALGGHQNAHKRERQRARRFLSHHTDRRRFIPQPPLMAAANHHRPRFLPKSNTSAHFSSTPIFIPSPYTTTSSRFPFQLQYASSPSLQQSSPSHVATLLPQKDHVGVNLNLSLSD 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0395 164 Gene3D Classic Zinc Finger 18 82 - -
Mibi02g0395 164 SUPERFAMILY beta-beta-alpha zinc fingers 33 64 IPR036236 -
Mibi02g0395 164 ProSitePatterns Zinc finger C2H2 type domain signature. 39 59 IPR013087 -
Mibi02g0395 164 ProSiteProfiles Zinc finger C2H2 type domain profile. 37 64 IPR013087 -
Mibi02g0395 164 PANTHER ZINC FINGER PROTEIN 5 6 163 IPR044299 GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0395 Mibi-ChrMibi02 3979476 3979970 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0395 6 96 C2H2 Transcription Factor Family AT5G06650 40.000 1.52e-14 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi02g0395 None None None