Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0380 ATGCTCCTTTTGCCAAATTCTTACAATTGTTTTGGATATAGTTTTTTATTAAGGCAATTATTCAATTCATATTCAAATGCCTCGTCTTTTCTGTATATTCATCCTCATCCCTCCCCTCATTATACAGATTATTATGGACACAGAAGTTTTCAAGGTAGACCAGAGACGACTGTAGTTCATCAATCTAGAAAATCCAATCCAATGAGGTTTCGCCTATCAATGATCTGCCGCCCTTCATCTGCTATCTTCTTTCTTGTGGCTCTTGTTGCAATGATAGTTGTCTTAACATTGACGCCGTGCTGGTATATTATGATCAAACAAATAGAGCAGCGAAATAATTCAAACTCACAGAATTTTCTCTTGGAATTACAAGATGAAATTGATCATTCTGCCAAACTATTGCCCCCCATGAAGTCAGCATCAGCCAATTTGGCACGAATTCTAAGTTCAACCTTTAACAAGACGGCCAATATCTCATTCTCTGACATTCATACTAAAGTAGCTCCAGTGTTATTTCAAGCATTTGAGGTGATTCCTCAGTTGTCCGAAATCTCGTACATTGGGATGGATGGTCTATTTTTCTCGTACTACACAGAACATGATCAAAATCTTGCAATGTACTCTAACTCTTCCTTTTCTTCAAGCTCGGGTGCTTCACAGATCACTTACTATGTTCAACCCGTAAATCTTGATTCTGGAGGATTATATGGTGAGGCCACAATATATAAGCACCCTGTTAATACAAGTTGGGCCATGGAAGCAATCAACAGTTCCAACGGATATGCCTCATTGGGATACAAGTGGAGTGACAGCCATCAGATTTTATACCTTAATTTGGTCAGAATCTCAAGAACAGGATTTATCTCATTAGGCCTTTCAGCAACGACGATTACAGACTTTGTCTCTCCCACCAGGCGTCAAGGTGCAAGCGTTTATTTGGCTTCCAAAGATGGAAAAGTGCTGCTACAAGGAATCCAGCATGCTCATATAGTACTCTATGGTGATACAGCTTCCTTCTATTCAGTGAAACCAATTGGTGAGCAATTGAGTTATCAGGGCACCATCTCATGTAAGGCCGATGCCATTGCTTCTGTTTTGAAAATTGGGGGTACTCAATATTTGACACGCTGCTCATCAATTGATATAGTGGGAGTAGAATTGGTGTACGTCTTGGCTATCCCCCAAAATGGATTGGTGATCTTTGTACATGAGAGCATGAAACGGGGACTGGTGCTAATGAGTACAATGATGGTGATGATATTGGTCTCTATCCTTAGTTTTCTTTTGTTAAACGCTAGAATGGGTAGGCGGGAGATGCATTTGTGTGTCTCTCTCATCAAACAAATGGAAGCCACTCAGCAAGCAGAGAGGAAGAGTATGAATAAGAGCCTTGCCTTTGCCAGTGCTAGCCATGATATTCGTGCTGCTCTTGCTGGCCTTACTGGTCTGATAGAGATGTCCTATGGAGAAGTTATCCCTGGTTCAGAAATGGAAGTCAATTTGAAACAAATGAGTGCTTGCACAGAAGACTTACTAGGGCTATTGAATTCTATACTTGACACGAGTAAAATTGAGGCGGGAAAAATGCAGCTTGATGAAGAGGAATTTGATCTGTCCCAAGTCATAGAAGAAGCAATTGATTGGTACTATCCCGCAGCTATGAAAAAAGGTGTTGATCTTGTCTTGGACCATTGTAATGGTTCGGTTATCAGATATTCACGTGTCAGAGGTGACAAAAGAAAGCTTAAACAAGTTTTGTATAATTTAGTAAACAATGCTGTTAAATTTACAAATGAGGGGCATATAGCAGTTCGAGCTTGGGCTCAAAAGCCAAGTTTCCAGAACTCAATAATGGCTTCAAAAAGATATAATTTTATCAAGCATTTGTCACACCTGTTTTACAAGAAAAGTGAATCAAATAGAGAAGTAAGAAATGCAATCCAACAGGACCCAAACTTGTTGGAGTTTGTGTTTGAAGTAGATGATACTGGAAAAGGAATTCCTAAAGAGAAGCTTAAGTCAGTGTTTGATAACTACGTTCAAGTCAAAGAAACTGCTTCAGGACTAGGAGGCACTGGCTTGGGACTTGGTATTGTGCAATCGCTGGTACGTTTGATGCATGGGGATATTGAAATTGTGGAAAAGGAAATAGGTGAAAAAGGATCATGCTTTAGATTCAATATCCTCCTTCACGTATGTGAGACAGACACAGGTGGAAGTAACAGTAAAGAAGGTAATGAATTAGGAAGTGCCATAAATTTCAATCAACTTCAAGGACAAGATATAAACACCCCTAGTTCTAGTTCTGGCATCTGTTCCCCCAGCCCAAAATTACCTCTTTTTGCCTCTAGTAGGTCAGGGGCTTCTTGCATTGTTCTTTTGATACAAAATGAAGAGCGGCGAAGAACTACCCGTAGGTTCATGGAGAGCTTAGGGATTAAAGTTAAGGTTGTTAAGCAGTGGGAACATTTATCTCATACTCTTAAGAAGATCAAGCAAAAGGGGCATCATTCTAGCCAGAGTTCTGTAGGAACGTCAGATGCTAGTTCAAGGTCTACATCTCAAAATTCTAATTCCAGGGCCAAAGGATTTCCTTTGAGTGATACAGATGGAAATTACAATATACCTTTGGCTTTTAATAAGTTGGAAGATAGAGCTTCCTTGGGTTTGGTTCTGCTTGTGATTGATTCAATTGCAGGACCCTTTTCAGAACTTAACAGAATGGTGTTTGCATTCAAAAGAGACCTTGGGAGTCATTGCAAGGTGGTTTGGTTAAATAAGCCACCTGTGCGTGAAAACAATTTCAAAACACCTGGTGAGGATGCATTAGATCCTGATGACATCATCTTGTCCAAGCCATTTCATGGCAGTCGTTTGTTTGATACTCTAAGGCTTCTTCCTGAGTTTGGTGGTAGTTCAGCTAATATTTCTAGAATGGGTAGGGTAAGGAGGGACATTATTCACAATAGACTTAGCAAACCATTCAAAGATCCCCACAAATCAAGATATCAGTCACCTATATCAGACAGAGCAGATTTTTTCTCATCTAATGCAGCCCCATTTCAAGACTACGGTCGTTCATCAAGAAGGGATCAACGGTATTCTTCTAGTAGGTCCAAAACAAGGAATTCTCAAAACGATGACCACAAAGAGATAGAAGAGTGCAGTCATTCAACCAATGACAAGCCCTTGGGTGGCAAGAAATTTTTGATTGCTGAGGACACCAAATATCTGCGCATGATAGCTTTTAAAACTTTGACACAGCTAGGTGCAAGTGCAGCTAATGTGAGTGAATGCGAAAATGGGGAAGAAGCGGTGAATCTAGTTGAGGACAGTTTAAAAGGGGCTTTTCCTTATGATTACATTTTAATGGACTGTGAGATGCCAGTAATTAATGGATTTGAGGCAACAAAGCAGATAAGGAAGATGGAGAAGGGGTATGGGGTTCACATACCTATCTTGGCCTTAACAGCCCATTCGTCAGGGGAGGAGATCAACAAGGCCAAGGAGGCAGGAATGGACGCACATTTAGACAAGCCACTAAGAGCAGACCATTTACTGGCTACCATTAAAAAGTTTCACAATAATACAGACTGA 3597 0.4037 MLLLPNSYNCFGYSFLLRQLFNSYSNASSFLYIHPHPSPHYTDYYGHRSFQGRPETTVVHQSRKSNPMRFRLSMICRPSSAIFFLVALVAMIVVLTLTPCWYIMIKQIEQRNNSNSQNFLLELQDEIDHSAKLLPPMKSASANLARILSSTFNKTANISFSDIHTKVAPVLFQAFEVIPQLSEISYIGMDGLFFSYYTEHDQNLAMYSNSSFSSSSGASQITYYVQPVNLDSGGLYGEATIYKHPVNTSWAMEAINSSNGYASLGYKWSDSHQILYLNLVRISRTGFISLGLSATTITDFVSPTRRQGASVYLASKDGKVLLQGIQHAHIVLYGDTASFYSVKPIGEQLSYQGTISCKADAIASVLKIGGTQYLTRCSSIDIVGVELVYVLAIPQNGLVIFVHESMKRGLVLMSTMMVMILVSILSFLLLNARMGRREMHLCVSLIKQMEATQQAERKSMNKSLAFASASHDIRAALAGLTGLIEMSYGEVIPGSEMEVNLKQMSACTEDLLGLLNSILDTSKIEAGKMQLDEEEFDLSQVIEEAIDWYYPAAMKKGVDLVLDHCNGSVIRYSRVRGDKRKLKQVLYNLVNNAVKFTNEGHIAVRAWAQKPSFQNSIMASKRYNFIKHLSHLFYKKSESNREVRNAIQQDPNLLEFVFEVDDTGKGIPKEKLKSVFDNYVQVKETASGLGGTGLGLGIVQSLVRLMHGDIEIVEKEIGEKGSCFRFNILLHVCETDTGGSNSKEGNELGSAINFNQLQGQDINTPSSSSGICSPSPKLPLFASSRSGASCIVLLIQNEERRRTTRRFMESLGIKVKVVKQWEHLSHTLKKIKQKGHHSSQSSVGTSDASSRSTSQNSNSRAKGFPLSDTDGNYNIPLAFNKLEDRASLGLVLLVIDSIAGPFSELNRMVFAFKRDLGSHCKVVWLNKPPVRENNFKTPGEDALDPDDIILSKPFHGSRLFDTLRLLPEFGGSSANISRMGRVRRDIIHNRLSKPFKDPHKSRYQSPISDRADFFSSNAAPFQDYGRSSRRDQRYSSSRSKTRNSQNDDHKEIEECSHSTNDKPLGGKKFLIAEDTKYLRMIAFKTLTQLGASAANVSECENGEEAVNLVEDSLKGAFPYDYILMDCEMPVINGFEATKQIRKMEKGYGVHIPILALTAHSSGEEINKAKEAGMDAHLDKPLRADHLLATIKKFHNNTD 1198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0380 1198 CDD REC_hyHK_CKI1_RcsC-like 1069 1190 - -
Mibi02g0380 1198 Gene3D - 1043 1197 - -
Mibi02g0380 1198 MobiDBLite consensus disorder prediction 1026 1059 - -
Mibi02g0380 1198 Pfam Response regulator receiver domain 1070 1190 IPR001789 GO:0000160
Mibi02g0380 1198 SUPERFAMILY CheY-like 1064 1194 IPR011006 -
Mibi02g0380 1198 SMART HKATPase_4 577 732 IPR003594 -
Mibi02g0380 1198 Gene3D - 448 528 - -
Mibi02g0380 1198 ProSiteProfiles Histidine kinase domain profile. 468 732 IPR005467 -
Mibi02g0380 1198 MobiDBLite consensus disorder prediction 990 1006 - -
Mibi02g0380 1198 PRINTS Bacterial sensor protein C-terminal signature 690 708 IPR004358 GO:0016310|GO:0016772
Mibi02g0380 1198 PRINTS Bacterial sensor protein C-terminal signature 656 670 IPR004358 GO:0016310|GO:0016772
Mibi02g0380 1198 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 516 728 IPR036890 -
Mibi02g0380 1198 MobiDBLite consensus disorder prediction 837 865 - -
Mibi02g0380 1198 SMART REC_2 1067 1190 IPR001789 GO:0000160
Mibi02g0380 1198 MobiDBLite consensus disorder prediction 1018 1059 - -
Mibi02g0380 1198 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 577 730 IPR003594 -
Mibi02g0380 1198 MobiDBLite consensus disorder prediction 829 865 - -
Mibi02g0380 1198 Gene3D - 529 737 IPR036890 -
Mibi02g0380 1198 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 449 529 IPR036097 GO:0000155|GO:0007165
Mibi02g0380 1198 ProSiteProfiles Response regulatory domain profile. 1068 1194 IPR001789 GO:0000160
Mibi02g0380 1198 CDD HisKA 462 523 IPR003661 GO:0000155|GO:0007165
Mibi02g0380 1198 PANTHER TWO-COMPONENT HISTIDINE KINASE 90 1192 - -
Mibi02g0380 1198 SMART HisKA_10 461 527 IPR003661 GO:0000155|GO:0007165
Mibi02g0380 1198 MobiDBLite consensus disorder prediction 990 1009 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0380 Mibi-ChrMibi02 3860156 3866877 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0380 81 1181 Histidine Kinase Gene Family AT2G47430 38.690 0.0 694
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mibi02g0380 HATPase_c 1.9e-25 CL0025