Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0378 ATGAAGGATCTGGACTTCAATGCAGACGAGTTTATTTCGAATTTCGCAGATGCAAACGGTGAAGCCAAATACATGAACATTTTGCAAGATGTTGCTAACCACAAAACCCGAGCTGTCCAAATTGATATTGGGGACTTGATCAATTATAAAGATCTAGACGAAGAATTTCTCATACGTGTGACTGAAAATACTCGGAGGTACATCGGAGTATTTGCGGATGCTATCGATGGTCTTATGCCAGAGCCCAATGAGGCCTTTACGGATGATGATCATGATATATTGATGACGCAAAGATCTGATGAAGGAGCAGAAGGTGCTGATGGTTCAGATCCTCTTCAAAAGATGCCTTCTGAGATCAAGCGCTACTTTGAGGTTTATATTAAGGCATCTTCAAAAGGGCGGCCATTTACAATTAGGGAGGTGAAGGCTTCATATATTGGTCAGCTTGTGAAGATATCAGGTATTGTGACACGATGCTCGGATGTCAAACCATTGATGCAGGTAGCTGTTTACACATGTGAAGATTGCGGTTTTGAAATTTATCAGGAAGTAACAGCTCGAAACTTCATGCCTTTGTTTGAATGTCCTTCTAAGCGCTGTGATACGAACCGAAGCAAGGGAAATCTCATCCTTCAACTAAGAGCATCAAAGTTCCTGAAATTTCAGGAGGCAAAAATACAAGAACTAGCTGAGCATGTTCCAAAAGGACATATCCCCCGAACAATGACTGTTCATTTCAGGGGAGAACTCACAAGAAAGGTAGCTCCAGGTGATGTTGTTGAATTATCTGGCATTTTTCTTCCCATACCTTTCACTGGTTACAGAGCAATGCGTGCTGGGTTAGTTGCTGATACTTACTTAGAGGCCATGTCTGTTACCCATTTCAAGAAAAGATATGAAGAGTATGAACTTTTAGGAGATGAAGAAGAGCAGATTTTGAAATTAGCTGAAGACGGTGACATCTACAACAAGTTGGCTAGATCATTGGCTCCTGAAATTTTTGGACATGAAGATATCAAGAAAGCATTGCTTCTTCTTCTAGTCGGTGCTCCCCACCGGAAGTTAAAAGATGGGATGAAGATAAGAGGAGATTTGCATATATGTCTGATGGGTGATCCTGGTGTGGCAAAGAGTCAGCTCCTTAAACACATAATTAACGTAGCACCAAGAGGAGTGTACACCACTGGCAAAGGAAGTAGTGGTGTAGGTCTAACTGCTGCTGTTCAGAAGGATCCGGTGACCAATGAGATGGTTCTGGAAGGTGGAGCATTGGTACTAGCAGATATGGGCATTTGTGCCATTGATGAGTTTGACAAGATGGATGAATCTGATCGTACAGCTATACATGAAGTTATGGAACAGCAGACTGTTAGCATTGCCAAGGCCGGAATCACTACATCCTTGAATGCAAGGACTGCTGTCCTTGCTGCTGCCAATCCAGCTTGGGGAAGATATGATCTAAGAAGAACTCCAGCAGAAAACATCAATCTTCCTCCCGCCTTGCTATCTAGATTTGATCTTCTGTGGCTAATCCTTGATCGAGCTGATATGGATAGTGATCTTGAAATGGCTAGGCATGTCGTCTATGTTCACCAGAATAAAGAATCTCCTGCTCTGGGATTCACTCCTCTTGAACCATCTGTTCTCCGAGCATATATATCAACTGCAAGAAGATTGTCTCCTAGTGTCCCTAGAGAATTGGAAGAGTACATTGCTACTGCTTACTCTAGCATTCGCCAAGAAGAAGCCAAGTCCAGTACTCCCCATTCCTACACAACTGTCAGAACTTTGCTCAGCATTCTCCGCATATCAGCTGCATTGGCAAGACTCCGCTTTTCAGAGACTGTTGCTCAGAGTGATGTGGATGAGGCGCTGAGGTTAATGCAGATGTCGAAGTTCTCTTTATACTCTGATGAGCGTCAAAGATCAGGTCTGGATGCTATATCTGATATCTATTCTATCCTGCGAGATGAAGCTGCTAGGAATAACAGAATGGACGTAAGCTATGCCCGCGCCCTCAATTGGATATCTAGGAAGGGTTACAGCGAAGCACAATTGAAAGAGTGTTTGGAGGAGTATGCAGCATTGAATGTTTGGCAGATACACCCCCACACTTTTGATATCCGTTTCATCGATGCCTGA 2142 0.4323 MKDLDFNADEFISNFADANGEAKYMNILQDVANHKTRAVQIDIGDLINYKDLDEEFLIRVTENTRRYIGVFADAIDGLMPEPNEAFTDDDHDILMTQRSDEGAEGADGSDPLQKMPSEIKRYFEVYIKASSKGRPFTIREVKASYIGQLVKISGIVTRCSDVKPLMQVAVYTCEDCGFEIYQEVTARNFMPLFECPSKRCDTNRSKGNLILQLRASKFLKFQEAKIQELAEHVPKGHIPRTMTVHFRGELTRKVAPGDVVELSGIFLPIPFTGYRAMRAGLVADTYLEAMSVTHFKKRYEEYELLGDEEEQILKLAEDGDIYNKLARSLAPEIFGHEDIKKALLLLLVGAPHRKLKDGMKIRGDLHICLMGDPGVAKSQLLKHIINVAPRGVYTTGKGSSGVGLTAAVQKDPVTNEMVLEGGALVLADMGICAIDEFDKMDESDRTAIHEVMEQQTVSIAKAGITTSLNARTAVLAAANPAWGRYDLRRTPAENINLPPALLSRFDLLWLILDRADMDSDLEMARHVVYVHQNKESPALGFTPLEPSVLRAYISTARRLSPSVPRELEEYIATAYSSIRQEEAKSSTPHSYTTVRTLLSILRISAALARLRFSETVAQSDVDEALRLMQMSKFSLYSDERQRSGLDAISDIYSILRDEAARNNRMDVSYARALNWISRKGYSEAQLKECLEEYAALNVWQIHPHTFDIRFIDA 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0378 713 FunFam DNA replication licensing factor MCM7 306 638 - -
Mibi02g0378 713 Gene3D - 3 96 - -
Mibi02g0378 713 ProSitePatterns MCM family signature. 430 438 IPR018525 GO:0003677|GO:0005524|GO:0006260
Mibi02g0378 713 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 331 640 IPR027417 -
Mibi02g0378 713 CDD MCM7 324 631 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Mibi02g0378 713 Pfam MCM P-loop domain 309 531 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mibi02g0378 713 ProSiteProfiles MCM family domain profile. 321 527 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mibi02g0378 713 Gene3D - 138 266 IPR012340 -
Mibi02g0378 713 PRINTS Mini-chromosome maintenance (MCM) protein family signature 474 486 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mibi02g0378 713 PRINTS Mini-chromosome maintenance (MCM) protein family signature 362 377 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mibi02g0378 713 PRINTS Mini-chromosome maintenance (MCM) protein family signature 450 463 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mibi02g0378 713 PRINTS Mini-chromosome maintenance (MCM) protein family signature 501 509 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mibi02g0378 713 PRINTS Mini-chromosome maintenance (MCM) protein family signature 422 436 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mibi02g0378 713 SMART mcm 134 633 IPR031327 GO:0003677|GO:0005524|GO:0032508
Mibi02g0378 713 Pfam MCM OB domain 138 268 IPR033762 -
Mibi02g0378 713 SUPERFAMILY Nucleic acid-binding proteins 10 289 IPR012340 -
Mibi02g0378 713 FunFam DNA replication licensing factor MCM7 165 219 - -
Mibi02g0378 713 Gene3D - 306 638 IPR027417 -
Mibi02g0378 713 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 188 200 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Mibi02g0378 713 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 171 182 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Mibi02g0378 713 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 280 290 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Mibi02g0378 713 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 115 127 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Mibi02g0378 713 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 153 164 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Mibi02g0378 713 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 11 642 IPR031327 GO:0003677|GO:0005524|GO:0032508
Mibi02g0378 713 Pfam MCM N-terminal domain 10 128 IPR027925 -
Mibi02g0378 713 Gene3D - 165 219 - -
Mibi02g0378 713 Pfam MCM AAA-lid domain 548 631 IPR041562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0378 Mibi-ChrMibi02 3826484 3831484 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0378 1 711 Core DNA Replication Machinery Family AT4G02060 83.799 0.0 1257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g0378 02 3826484 3831484 Mibi02g0378 02 3826484 3831484 ECH