Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0355 ATGTATATTTATATGGGCCCAAGTGACCCTCTCCATGACCACGCCTCTCCCTACAGACTCTTCTATCAGGCATCAGCTATCGCGCAAACCATCATTCTATGTTTCCTTCCCTACCTCTCAAGTCTCAACCCTGTTGAACACATGACGCCGCCTTCTGTGAAAGCAGAACTGAGTCACAAGAACGCAACGGTCTCAAATGGCAACATTAACCCTTTTATTCCTCTCGACGTCATTGAACAAATTTTTCACAGAGCGGATACAAAAACTCTAATTCGATGTTCCTCTGTTTGTCGAGATTGGAATGCCCTTATTACTAGTCCCGATTTCATGTTCCGCAACTTAAACCAGACTTTTGATTCTAAAAAACAGATGATCCTTCTTAAAGCACGTCAGAACAGGGAGAGCGGAACCAATGTGATGGAATATGATCGTTTTTTACATTGCCCGTCCACAATAACCTATTCATTGCATTGGGATGAGGATCAATTCAATTTGTTTCGCATAATGGAGAGTCCTCCCATCAGTAATTTTGGAGGAACACATGTGATAGATGTCAGTAATGGATTAGTATGTTTGATAAAGGAACTACCTTTCGAAATAATTCTTTGGAACTTAACTATTCGAAAATATGTATGCTTGCCCCTTCCCATGACTTGGAATGATTATTGTTCTCATGTAGGCTTTGGTTTTGATCGTATCAACAATGACTTTAAGGTTGTAAACCTCGTTACAAATGAGTTTATGCACCCTACCCAGTTTCAGTCAACTTGGATTTTCTCATATGTCACAGGATCATGGAAATGTCTCACATGCAATCTTCCTCCTCAATGGTTCATTTATTGTGGCCAGACCTGTGTATCCTTGAATGGTGTCCTTCATTGGATCGCCTGGTGCAAAGAAGATGCGCATAAACCCAGATATTTTATACTCACATTTGATCTGACACTTGAAGTGTTTGGACAAATATTTTTTCCGAGTGGCGCACGTCACGATTGTGTAAATCATATCGTGACAGCCGAGGATTCGCTTCTCTTGATACAGGAGACACATGTAAATGATGATGGAGTGAATGAAGATGGGGTAGTATCTAACTTCTTTTCTGTCTGGATTATGAAACAATTCGGCAGCCATGTGTCATGGAAAAACATATTCTCGACAACATCAGAGATAGATCCTGAATTGATACTAGGGGCAAGGAAAAATGGTGAAATCATGTTAGACATGGGAGGTGGGGAGATATGCAGATACAATCTAACAACTCCAACAATTGTTCCAGCCGAAACTATGAAGAATGGTAATTTGGGATGTTTTGATTCTGATATATTGGCTGCATTCGACACCACCGTGGCTGACGGTGTCGATGTGATTTCGCACTCGATCGGCGGTGGTGACGGCGTCATTTCGCCGTTCTATCTTGACCCAATTGCGATTGGGTCATACGGTGCTGCTTCAAGAGGATTTTCAAGCGGAGGTGGTTCTCGGCGATGGGAAGAAGCTCTCTGGGGTGTCGTTATACTCTGGGAAGAAACAGCGGTTCCAGGCAGCATCAGCTATCGCGCAAACCATCATTCTATATTTCTATGTTTCCTTCCCCACCTCTCAAATCTCAACCCTGTTGATGTTGAACACATGACGCCGCCTTCCGTGAAAGCAGAACTGAGTCATAAGAACGCAACGGTCTCAAATGGCAACATTAACCCTTTTATTCCTCTCGACGTCATTGAACAAATTTTTCACAGAGCGGATACAAAAACTCTAATTCGATGTTCCTCTGTTTGTCGAGATTGGAATGCCCTTATTACTAGTCCCGATTTCATGTTCCGCAACTTAAACCAGAATTTTGATTCTAAAAAACAGATGATCCTTCTTAAAGCAAGTCAGAACAGGGAGAGCGGAACCAATGAGATGGAATATGATCGTTTTTCACATTGCCCGTCCACAATAACCTATTCATTGCATTGGGATGATGATCAACTCAATTTGTTTCGCATAATAGAGAGTCCTCCCATCAGTGATTTTGAAGGGACACGTGTGATAGATGTCAGTAATGGATTAGTATGTTTGATAAAGGAACTACCTTTCGAAATAATTCTTTGGAACGTAACTTTTCGAAAATATGTATGCTTGCCCCTTCCCAAGACTTGGAATGGTTATCGTTCTTGGAATGGTTATCGTTATCATGTAGGCTTCGGTTTTGATTATATCAACAATGACTTTAAGGTTGTAAACCTCGTTACAAATAAGTTTATGCACCCTACCCAGTTTCAGTCAACTTGGATTTTCTCATATGTTACAGGGTCATGGAAACGTCTCACATGCAATCTTCCTCCTCAATGGTTCATTTATTGTGGCCAGACCTGTGTATCCTTGAATGGTGTCCTTCATTGGATCGCCTGGTGCAAAGAAGATGCGCATAAACCCAGATATTTTATACTCACATTTGATCTGACACTTGAATTGTTTGGACAAATATTTTTTCCGAGTGGCGCACGTCACGATTGTGTAAATCATATCGTGACAGCCGAGGATTCGCTTCTCTTGATACAGGAGACACATGTAAATGATGATGGAGTGAATGAAGATGGGGTAGTATCTAACTTCTTTTCTGTCTGGATTATGAAACAATTCGGCAGCCATGTGTCATGGAAAAACATATTCTCGACAACATCAGAGATAGATCCTGAATTGATACTAGGGGCAAGGAAAAATGGTGAAATCATGTTAGACATGGGAGGTGGGGAGATATGCAGATACAATCTAACAACTCCAACAATTGTTCCAGCCGAAACTATGAAGAATGGTGTTTTTTTCTGTTATTTTACAAAGAGCTTGTATTTGCTTGAAAGGGGGAAAGGGATTAGTTCTTACTAA 2871 0.4114 MYIYMGPSDPLHDHASPYRLFYQASAIAQTIILCFLPYLSSLNPVEHMTPPSVKAELSHKNATVSNGNINPFIPLDVIEQIFHRADTKTLIRCSSVCRDWNALITSPDFMFRNLNQTFDSKKQMILLKARQNRESGTNVMEYDRFLHCPSTITYSLHWDEDQFNLFRIMESPPISNFGGTHVIDVSNGLVCLIKELPFEIILWNLTIRKYVCLPLPMTWNDYCSHVGFGFDRINNDFKVVNLVTNEFMHPTQFQSTWIFSYVTGSWKCLTCNLPPQWFIYCGQTCVSLNGVLHWIAWCKEDAHKPRYFILTFDLTLEVFGQIFFPSGARHDCVNHIVTAEDSLLLIQETHVNDDGVNEDGVVSNFFSVWIMKQFGSHVSWKNIFSTTSEIDPELILGARKNGEIMLDMGGGEICRYNLTTPTIVPAETMKNGNLGCFDSDILAAFDTTVADGVDVISHSIGGGDGVISPFYLDPIAIGSYGAASRGFSSGGGSRRWEEALWGVVILWEETAVPGSISYRANHHSIFLCFLPHLSNLNPVDVEHMTPPSVKAELSHKNATVSNGNINPFIPLDVIEQIFHRADTKTLIRCSSVCRDWNALITSPDFMFRNLNQNFDSKKQMILLKASQNRESGTNEMEYDRFSHCPSTITYSLHWDDDQLNLFRIIESPPISDFEGTRVIDVSNGLVCLIKELPFEIILWNVTFRKYVCLPLPKTWNGYRSWNGYRYHVGFGFDYINNDFKVVNLVTNKFMHPTQFQSTWIFSYVTGSWKRLTCNLPPQWFIYCGQTCVSLNGVLHWIAWCKEDAHKPRYFILTFDLTLELFGQIFFPSGARHDCVNHIVTAEDSLLLIQETHVNDDGVNEDGVVSNFFSVWIMKQFGSHVSWKNIFSTTSEIDPELILGARKNGEIMLDMGGGEICRYNLTTPTIVPAETMKNGVFFCYFTKSLYLLERGKGISSY 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0355 956 Pfam F-box associated 285 394 IPR006527 -
Mibi02g0355 956 Pfam F-box associated 787 896 IPR006527 -
Mibi02g0355 956 SUPERFAMILY F-box domain 569 615 IPR036047 GO:0005515
Mibi02g0355 956 Gene3D - 73 109 - -
Mibi02g0355 956 Gene3D - 569 605 - -
Mibi02g0355 956 Pfam F-box-like 72 114 IPR001810 GO:0005515
Mibi02g0355 956 Pfam F-box-like 568 610 IPR001810 GO:0005515
Mibi02g0355 956 ProSiteProfiles F-box domain profile. 569 610 IPR001810 GO:0005515
Mibi02g0355 956 Gene3D Peptidase S8/S53 domain 434 486 IPR036852 GO:0004252|GO:0006508
Mibi02g0355 956 TIGRFAM F_box_assoc_1: F-box protein interaction domain 187 395 IPR017451 -
Mibi02g0355 956 TIGRFAM F_box_assoc_1: F-box protein interaction domain 683 897 IPR017451 -
Mibi02g0355 956 SUPERFAMILY Subtilisin-like 433 487 IPR036852 GO:0004252|GO:0006508
Mibi02g0355 956 SUPERFAMILY F-box domain 73 119 IPR036047 GO:0005515
Mibi02g0355 956 SMART fbox_2 569 609 IPR001810 GO:0005515
Mibi02g0355 956 SMART fbox_2 73 113 IPR001810 GO:0005515
Mibi02g0355 956 ProSiteProfiles F-box domain profile. 73 114 IPR001810 GO:0005515
Mibi02g0355 956 PANTHER BNACNNG10540D PROTEIN 59 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0355 Mibi-ChrMibi02 3545917 3554779 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0355 435 487 Subtilisin-like Serine Gene Family AT4G34980 81.132 2.02e-19 92.0