Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0345 ATGGTGGCTGAAGCAGACGTGGTTTGCCAACAGAGCCTTCCTCTGTTGGATGTACAGTTTATCGCCAAAGCAAGCAGTATTCATGAGATCGAAGATCCACCTTTCGTCTCGCCATCACCCCTTCCTGACAAAGAAGCACTGAATTCACAACATGTGAGTTTTTCCAGCACCCTTCCCATGTTTTCTTTTCTCCAATTCTCTTCCTATGACATGGACGGTAATGAATTGATTGCTGAGTTAGTAATGATTCCGATCGAGGTTGTTCAGCGCCTAGGCGAGGGACGCGGTCACAAAACTGATGTTATTGCAGCAAAACAGGTTCCCTGTGCTTCTCTTGACTCTTCTGTTGTGCAGTTTGTACCCAGCATCCGTTCTGGTAGTTATGCCGACATTGGGCCGCGTAGATACATGGAAGACGAGCATATAATGATTGATGATTTATCCTCTCACCTGGGATCACTTTATAAGTTCCCTAAACCCAGTGCCTTTTATGGGGTGTTTGACGGTCATGGAGGATCTGAAGCTGCAGTTTATATCCGTAAAAATGTGATAAGATTTATTTTCGAGGACTCCTGCTTCCCACAGTCATCTGAAGTTGATAATGCTTTCTTGCAAGAATCAGAGAACTCCCTTAAGAAGGGTTTTCTTTTGGCCGACTTAGCTTTGGCTGATGATTGCAGTGTCAGTAGCTCATCAGGCACCACGGCGCTCGCAGCTTTAATATTTGGAAGGCTGTTGATGGTGACCAATGCTGGTGATTGTCGAGCAGTTCTTTGTCGGAAAGGGGAGGCAATTGACATGTCTCAAGATCACAGGCCTATATATCCATCGGAACGTAGGCGTGTCGAGGAATCAGGTGGTTTCATAGACGATGGCTATCTCAATGGGGAGTTATCAGTAACTCGAACTCTAGGAGACTGGGACATGAAGCTCCCCAAGGGTTCTCCCTCACCTCTGATTGCAGAGCCAGAGTTTAGGCAAGTGGTTCTAACGGAGGAGGATGAGTTTCTCATCATAGGATGTGATGGAATATGGGATGTTATGTCAAGTCAGCATGCAGTGAGTCTTGTTAGGAGAAGTCTGAGGCGGCACGATGATCCGGAGAAGGGTGCCAGAGATCTTGTTATGGAAGCTTTGCGGATGAATGCGTTTGACAATCTCACAGTAATTGTAGTGTGCTTCACATCACCGGATCACAGGGAATTATCATCCGCTCAGAGGTTGAGACGTTGTAGCATCTCTGCAGAAGCACTTGGTAGCTTGAGAAGTTTATTAGAAGGCAGTGCTAGCAACTGA 1296 0.4637 MVAEADVVCQQSLPLLDVQFIAKASSIHEIEDPPFVSPSPLPDKEALNSQHVSFSSTLPMFSFLQFSSYDMDGNELIAELVMIPIEVVQRLGEGRGHKTDVIAAKQVPCASLDSSVVQFVPSIRSGSYADIGPRRYMEDEHIMIDDLSSHLGSLYKFPKPSAFYGVFDGHGGSEAAVYIRKNVIRFIFEDSCFPQSSEVDNAFLQESENSLKKGFLLADLALADDCSVSSSSGTTALAALIFGRLLMVTNAGDCRAVLCRKGEAIDMSQDHRPIYPSERRRVEESGGFIDDGYLNGELSVTRTLGDWDMKLPKGSPSPLIAEPEFRQVVLTEEDEFLIIGCDGIWDVMSSQHAVSLVRRSLRRHDDPEKGARDLVMEALRMNAFDNLTVIVVCFTSPDHRELSSAQRLRRCSISAEALGSLRSLLEGSASN 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0345 431 CDD PP2Cc 123 394 IPR001932 -
Mibi02g0345 431 PANTHER PROTEIN PHOSPHATASE 2C 117 392 IPR015655 GO:0004722|GO:0006470
Mibi02g0345 431 SUPERFAMILY PP2C-like 117 395 IPR036457 -
Mibi02g0345 431 FunFam Probable protein phosphatase 2C 22 109 397 - -
Mibi02g0345 431 SMART PP2C_SIG_2 139 394 IPR001932 -
Mibi02g0345 431 Pfam Protein phosphatase 2C 134 386 IPR001932 -
Mibi02g0345 431 ProSiteProfiles PPM-type phosphatase domain profile. 124 394 IPR001932 -
Mibi02g0345 431 Gene3D - 112 401 IPR036457 -
Mibi02g0345 431 ProSitePatterns PPM-type phosphatase domain signature. 163 171 IPR000222 GO:0043169
Mibi02g0345 431 SMART PP2C_4 114 392 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0345 Mibi-ChrMibi02 3452581 3454748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0345 137 427 PP2C-type Phosphatase Gene Family AT3G62260 67.347 1.08e-142 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Mibi02g0345 PP2C 2.7e-63 CL0238