Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0337 ATGAGCATAAAACACGGTCATAATTATAAACAGCGCATTCGTAGCCTGGATGCTGTAGTTGACTTTGGAGGGTTTGGTGGTTCCTTGGTCCTTGCTGGCTATGTGGGTTGCCCTCTATTGGAATCATGGAGGCGTGGCTTACATCTCCGTGTTAATTTTGTGGATTCGTTGATAGACTGGGACAATTCGATTGCGATTAAGACTATGGAGGCTAGATCTGGCCCTGAAGCCTTTCACTTTTATGGGATTGGTTCGTCGGATTTGCGGGGATTGGGGAAGAGGTCTGTTGAATGGAACTTGAACGATTGGAAATGGGATGGTGATCTTTTTATAGCCAGCCCGATGACACCAGTGCCTGAAGATAGCGTAGGCCGACAATTTTTCCCTCTTGGGTCTGGGATCCCTGTGGCTGGAGGAGGGTCCTCTAATAGTTCTTCCTCTTGCTCGGATGAAGTGAATCTAGGGGTTGATACGCGGAAGAAGGAAGGAGAAAGGAAAAGGAGGGTTATTGTGGTGGAGGATGACAGCTTGAATGAGGGAGCAGGTGGGCTTAGCTTAAAGCTTGGGGGCCATGACTCTCCAATTGCTGATAGGGAGGTGGCAACCTGGGAAGGAATGAATGGAAAAAAAACCAGAGTCGCCGGAGGCTCATCAAATCGAGCTGTTTGTCAGGTGGAGGATTGTGGCGCAGATCTGAGCAGTGCTAAGGATTATCACAGGCGCCATAAGGTTTGTGAGATGCATTCAAAGGCCAGCAGGGCACTTGTGGGGAATGTAATGCAGCGGTTCTGCCAGCAATGTAGTCGGTTTCACATCCTTCAGGAGTTTGATGAAGGGAAGAGAAGTTGTCGAAGGCGCCTGGCAGGCCACAATAAAAGGAGGAGGAAAACAAATAATGATGCTGTTCCTAATGGCAGTTCAATAAACGATGATCAGACTAGCAGTTATCTGTTGATTACATTGTTGAAGACACTTTCAAATATGCATTCTAACAGGTCGAATCAGACCACAGATCAAAATCTGCTATCTCATCTTCTTAAGAGCCTGGCTGGTCAAAATGGTGAACATGGGGCCAAGAGCTTGCCTGGCCTTTTGCGGGAACCAGAGAATTTGTTGAAAGAAAATAGTTCTCCTGGTAAGTCGGATGTGGTTTCTGCTTTATTCTCTAATGGTTCTCAAGTCTCTCCAACTGTTATGAGACAACCGCAAACAATATCTGTGACTGAAATTCAACATCAAGGGATGCTTGATGCTGGGGCTGCTGATCAACAGACCATGTCTTCTACTAAACCTAGCATGAGTAACAGTCCTCCAGTTTACTCAGAAGCCAGGGACAGTGTTGCTGGACAGGGCAAGATGAATAATTTTGATTTGAATGACATATATATTGACTCAGATGATGGCATAGAAGATATTGAAAGATTGCCTGTCTCTGCAAACCTTGGGGCTAGTTCTCTTGATTACCAGTGGGCACAACAAGATTCTCATCAATCAAGCCCACCTCAGACAAGTGGAAATTCAGATTCTGCATCTGCTCAGTCCCCTTCTAGTTCAAGTGGAGAAGCTCAGAGCCGCACAGATCGAATTGTTTTTAAGCTCTTTGGCAAAGAACCAAATGATTTTCCTCTTGTACTTAGAGCACAGATTCTTGACTGGTTATCACACAGTCCTACTGACATTGAGAGCTACATACGGCCTGGATGTATTGTTTTGACCATTTATCTGCGTCAGACAGAGGCTGTATGGGAGGAGCTTTGCTATGATCTTGCTTCAAGTTTGAATAGGCTTATTGATGTCTCGGATGGTGACTTTTGGAGAACTGGATGGGTTTACACAAGAGTTCAGCATCAGATAGCCTTCATTTTCAATGGCCAGACTGTCATAGATAGATCCTTACCTTTAAGAAGTAAAAGTTATAGTAAGATCATGAGTGTTAGTCCAATTGCTGCACCGGCATTCAAAACAGCTCAATTTTCAGTCAAGGGTATTAATCTGATTCGCCCAGCAACTAGGTTATTATGTGCTCTAGAAGGGAAATATATGGTCTGTGAAGATGCTCAGGAGCCAATGGAGCAGTGCTCCAAAGAGCTTGATAAGCTCCAGTGCGTCCAATTTTCATGTTCTGTTCCTGTGATGAATGGAAGAGGATTCATTGAGATTGAGGACCAGGGCTTGAGCAGCAGCTTTTTTCCTTTCATAGTCACAGAAGAGGATGTTTGCTCAGAAATCTGTGCACTTGAGCCTTTACTAGAATCGGGCAAAGCTGATTCTGATTTTGGAGGATCTGGAAAATTTATGGCCATAAGTCAAGCCATGGATTTTATTCATGAAATGGGTTGGCTTCTCCACAGGAGCCAATCGAAATCTAGGCTGGTCCACCCAAACTCTAATGTAGATCTTTTTCCATTAAAACGGTTCAAGCAGCTCATGGAGTACTCTATGGACCATGATTGGTGTGCAGTGGTGAAGAAACTATTGAACCTATTACTTGATGGAACTGTGGATGCAGGAGATCAGCCATCCCTATATTTGGCACTTTCAGAGATGGGACTCCTTCATAAAGCTGTGAGGAGGAATAGCAGGCCGTTGGTGGAGTTACTTATGAGATATGTCCCTGAGAAAATTTCTGATACACTGGGACCTGAAAAAGAGGCACTAGCTGACGTTGGGAACCAGAGCTTCTTGTTTAGACCTGACATTGTTGGTCCAGCAGGCTTGACACCACTTCATATTGCAGCTGGAAAAGATGGTTCTGAGGATGTATTGGATGCTCTAACTAATGATCCTTGCAAGGTAGGAATTGAAGCATGGAAGAGTGCACGTGACAGCACAGGCTTTACACCTGAAGATTATGCACGCTTACGTGGTCATTATGCATACATTCACTTGGTTCAGAAGAAAATCAACAAGAGACAAGCAGCAGCAGCATCTCATGTGTTGGTAGATATCCCTAGCAATCTGACTGAGTCTAGTATACATCAGAAGCAAACTGAGTCATCCACTAGCTTGGAGATCGAAAAGGTTGAAGGAATCCGTGTGCAAAGACATTGCAAACTTTGCGACCATAAGTTGTCTTGTAGGACTGCAGTTGGAAGGTCTTTAGTGTACAAACCTGCCCTGCTCTCAATGGTGGCCGTAGCAGCTGTGTGTGTCTGCGTGGCTCTTCTGTTCAAAAGCTCACCTGAAGTTCTGTATGTGTTCCAACCCTTCAGGTGGGAATCACTGGATTTCGGAACAAGCTGA 3243 0.4487 MSIKHGHNYKQRIRSLDAVVDFGGFGGSLVLAGYVGCPLLESWRRGLHLRVNFVDSLIDWDNSIAIKTMEARSGPEAFHFYGIGSSDLRGLGKRSVEWNLNDWKWDGDLFIASPMTPVPEDSVGRQFFPLGSGIPVAGGGSSNSSSSCSDEVNLGVDTRKKEGERKRRVIVVEDDSLNEGAGGLSLKLGGHDSPIADREVATWEGMNGKKTRVAGGSSNRAVCQVEDCGADLSSAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHILQEFDEGKRSCRRRLAGHNKRRRKTNNDAVPNGSSINDDQTSSYLLITLLKTLSNMHSNRSNQTTDQNLLSHLLKSLAGQNGEHGAKSLPGLLREPENLLKENSSPGKSDVVSALFSNGSQVSPTVMRQPQTISVTEIQHQGMLDAGAADQQTMSSTKPSMSNSPPVYSEARDSVAGQGKMNNFDLNDIYIDSDDGIEDIERLPVSANLGASSLDYQWAQQDSHQSSPPQTSGNSDSASAQSPSSSSGEAQSRTDRIVFKLFGKEPNDFPLVLRAQILDWLSHSPTDIESYIRPGCIVLTIYLRQTEAVWEELCYDLASSLNRLIDVSDGDFWRTGWVYTRVQHQIAFIFNGQTVIDRSLPLRSKSYSKIMSVSPIAAPAFKTAQFSVKGINLIRPATRLLCALEGKYMVCEDAQEPMEQCSKELDKLQCVQFSCSVPVMNGRGFIEIEDQGLSSSFFPFIVTEEDVCSEICALEPLLESGKADSDFGGSGKFMAISQAMDFIHEMGWLLHRSQSKSRLVHPNSNVDLFPLKRFKQLMEYSMDHDWCAVVKKLLNLLLDGTVDAGDQPSLYLALSEMGLLHKAVRRNSRPLVELLMRYVPEKISDTLGPEKEALADVGNQSFLFRPDIVGPAGLTPLHIAAGKDGSEDVLDALTNDPCKVGIEAWKSARDSTGFTPEDYARLRGHYAYIHLVQKKINKRQAAAASHVLVDIPSNLTESSIHQKQTESSTSLEIEKVEGIRVQRHCKLCDHKLSCRTAVGRSLVYKPALLSMVAVAAVCVCVALLFKSSPEVLYVFQPFRWESLDFGTS 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0337 1080 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 145 963 IPR044817 GO:0003677
Mibi02g0337 1080 FunFam Squamosa promoter-binding-like protein 14 214 284 - -
Mibi02g0337 1080 MobiDBLite consensus disorder prediction 418 446 - -
Mibi02g0337 1080 Gene3D - 213 284 IPR036893 GO:0003677|GO:0005634
Mibi02g0337 1080 MobiDBLite consensus disorder prediction 418 441 - -
Mibi02g0337 1080 ProSiteProfiles Zinc finger SBP-type profile. 220 297 IPR004333 GO:0003677
Mibi02g0337 1080 Gene3D - 820 980 IPR036770 -
Mibi02g0337 1080 MobiDBLite consensus disorder prediction 287 308 - -
Mibi02g0337 1080 SUPERFAMILY SBT domain 221 301 IPR036893 GO:0003677|GO:0005634
Mibi02g0337 1080 SUPERFAMILY Ankyrin repeat 848 963 IPR036770 -
Mibi02g0337 1080 MobiDBLite consensus disorder prediction 490 524 - -
Mibi02g0337 1080 Pfam SBP domain 223 296 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0337 Mibi-ChrMibi02 3382921 3390345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0337 92 1080 SBP-box Gene Family AT3G60030 56.362 0.0 983
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mibi02g0337 SBP 1.7e-29 No_clan