Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0334 ATGAATAATAAGATATTCCTTCCCGGGGTTGCAATCATCCTAGTCGTAGGCTGTGTTGTCGGGGCCATTGTTCTCCTCACACAAAGTCACCACGGCGGCGGTGGAGGAGGAGGAGGCGGCGTGGCGTCGCATTCGAAGGCGGTGACGGCGATATGCCAAGGCTCACGCTACAAAAAAGAATGTGAAGACGCTTTAGGGTCCGTAAATTCAACGGACCCAAAAGAATACATAACGACGGTGGTAACCAAAGTGATGGAAAAGGTGATAGGTGCAGCCAACATGAGTGACAAGCTCGCCGTGGAACATAAATCAGGAGAGAATGGTGTGAAGATGGCCCTTGATGATTGCAAGGACTTATTGCAATCAGCCATGGATTCATTGGAGGCATCTAGTGTTATGCTCAAAGGTGACGACGATGTTAGAAACATAGGGAACAGAACAGACGACCTTAGAAACTGGTTCGCTATGGTGTTGTCATTCCAACAATCATGTTATGACGGCTTTGATGACGGCGCTGGCGGTGAGAAAGAGGTGAGAGACACACTCCATACACAAGGTGGCTTCGACGGAATACAGAAGCTGACGGCGGTGGCGCTTGACGTTATCTCCGGCGTTGACAACCTGCTTTCTATGTTTGACTTGGATTTGACGGCGGTGAAGGCTCCGTCACGTCGTCTTTTGGAGGAGGAAGAGGAAGATCCGAGGTGGTTGTCGGAGGCTGATAGGAGGCTATTGGGAAAGAAGCCTAAGCCCAATGCAGTGGTAGCGAAAGATGGTAGCGGTCACTTTAAAACCATAACGGACGCTATTAATTCGTACCCTAAGAATCATACGGGCAGATTCATTATCCATGTTAAAGCTGGTGTTTATAAAGAGTACCCTCTTGTTGACAAGAAAAAGCCTAATATTTACATGTACGGAGATGGCGCTACTAGAACCATCATCACCGGAGACAGATGTGTCGAGCCCAAGAAGGAGTGGAAGACCTTCACCAGTGCCAGCTTCGCTGTTGCTGGGGACATGTTCATTGCTAGGGGAATAGGATTCGAGAACACGGCTGGGTCGGTGGGACATCAAGCGGTGGCGCTCCGGACGCAGGCACCACATGCGGCATTTTACCAGTGTGCCTTTAGAGGATTCCAAGACACATTGTACGTGCAGGCTGGGGTCCAGTTGTTCCGGGAGTGTGAGATCACAGGAACCATCGACTTCATTTTTGGTGCATCAAGAACTCTGATTCAGAAATCACACATCATTATGAGGAAGCCAATGGAGAACCAACAGAACATAGTGGTGGCAGATGGTACCTTGGACTCCAAGGCAGGAACTGGGGTTGTGATTCAGAACTGTAACATATCCGCAGAGCAAGGACTTGACAAGAATAAGAATCCTTGTTACTTGGCGAGGCCATGGAAGGCTTACTCTAAGGCCATCTTCATGGAAAGTAATCTTGGTGCTCAGATTCACAAAGATGGATATCTTCCGTGGAATGGTGATATGTTCCTAAAAACATGTTACTTTGCTGAATATGCCAACACTGGAACTGGTTTTAGTCCCTCCACTAGGGTCAAGTGGGGTCGGGGACAGCTCAAAAAGAATCAAGCTTCTGCATATACTGCTACTCGATACCTTGAAGGTGCTGGTATCCCATGGTTGGCTACCACTGGTGTTCCTTACGATCGTAGCTTCACCAAGTCTTAA 1701 0.485 MNNKIFLPGVAIILVVGCVVGAIVLLTQSHHGGGGGGGGGVASHSKAVTAICQGSRYKKECEDALGSVNSTDPKEYITTVVTKVMEKVIGAANMSDKLAVEHKSGENGVKMALDDCKDLLQSAMDSLEASSVMLKGDDDVRNIGNRTDDLRNWFAMVLSFQQSCYDGFDDGAGGEKEVRDTLHTQGGFDGIQKLTAVALDVISGVDNLLSMFDLDLTAVKAPSRRLLEEEEEDPRWLSEADRRLLGKKPKPNAVVAKDGSGHFKTITDAINSYPKNHTGRFIIHVKAGVYKEYPLVDKKKPNIYMYGDGATRTIITGDRCVEPKKEWKTFTSASFAVAGDMFIARGIGFENTAGSVGHQAVALRTQAPHAAFYQCAFRGFQDTLYVQAGVQLFRECEITGTIDFIFGASRTLIQKSHIIMRKPMENQQNIVVADGTLDSKAGTGVVIQNCNISAEQGLDKNKNPCYLARPWKAYSKAIFMESNLGAQIHKDGYLPWNGDMFLKTCYFAEYANTGTGFSPSTRVKWGRGQLKKNQASAYTATRYLEGAGIPWLATTGVPYDRSFTKS 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0334 566 SUPERFAMILY Pectin lyase-like 249 558 IPR011050 -
Mibi02g0334 566 SMART PMEI_2 43 201 IPR006501 GO:0004857
Mibi02g0334 566 ProSitePatterns Pectinesterase signature 2. 398 407 IPR033131 -
Mibi02g0334 566 Pfam Plant invertase/pectin methylesterase inhibitor 47 199 IPR006501 GO:0004857
Mibi02g0334 566 Gene3D - 246 563 IPR012334 -
Mibi02g0334 566 Pfam Pectinesterase 252 546 IPR000070 GO:0030599|GO:0042545
Mibi02g0334 566 PANTHER PECTINESTERASE 19 553 - -
Mibi02g0334 566 FunFam Pectinesterase 4 249 563 - -
Mibi02g0334 566 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Mibi02g0334 566 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 46 176 IPR035513 -
Mibi02g0334 566 TIGRFAM PME_inhib: pectinesterase inhibitor domain 42 175 IPR006501 GO:0004857
Mibi02g0334 566 CDD PMEI-like_3 50 203 - -
Mibi02g0334 566 Gene3D Invertase/pectin methylesterase inhibitor family protein 44 205 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0334 Mibi-ChrMibi02 3308468 3310770 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0334 4 563 Carbohydrate Esterase AT5G49180 36.760 3.15e-112 344