Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0329 ATGGTCACAGGGGAGAGACAGGCCGCGAGAATAAGGGGTTTGTATTTGAAAACAATACTAAGACAAGATGTGGCTTTTTTTGACAAGGAAACAAACACCGGAGAGGTTGTCAGTAGAATGTCAGGTGACACTGTTCTTATACAAGACGCCATGGGTGAAAAGGTTGGAAAATTTCTGCAGCTAATGTCAACGTTCTTTGCGGGTTATGTAGTAGCATTTGCGAAAGGGTGGCTTCTCAGCCTTGTCATGTTGTCCACTCTTCCACTTCTTGTGGTGTCTGGTGCTGCTATGGCCTTCATAATAGGCAGGATGGCATCTCAAGGCCAAACAGCTTATGGAAAAGCTTCAAACATCGTTGAACAGACAATTGGCGCGATTAGAACGGTTGCATCATTCACGGGAGAGAAGCATGCCGTATCTAGTTACAGCAGGTTTCTTGTAGATGCATATAAATCAGGGGTTCAGGAAGGTTTTGTAGCAGGAGCTGGTATTGGGACTGTTATGTTCGTGATTTTCTGTGGCTATGCCCTGGCCATATGGTATGGTGCAAAGTTGATACTGGATAATAAAGGAGGGTATAATGGTGGTACAGTGATTACTGTGGTCTTTGCCGTCCTAACTGCTTCCATGAATCTTGGTCAGGCAGCCCCTTGTTTGACTGCTTTTACGGCAGGCCAAGCTGCAGCTTATAAAATGTTCAAGACTATTGAGAGAAAACCAGAGATAGATTCTTATGATGACAAAGGGAAAGTATTAGAAGATATTCAAGGGGAAATAGAGTTGAGAGAAGTTTATTTCAGTTACCCAGCTAGACCTGGGGAGCTGATTTTTGATGGCTTCTCTCTTAAAATACCAAGTGGTACAACTGCAGCTCTGGTTGGACAGAGTGGAAGTGGGAAGTCCACTGTGGTCAGTTTAATAGAAAGATTTTATGATCCACAATCAGGTGAAGTTCTTATAGATGGCATTAACTTGAAAGAATTCCAACTCAGATGGATTAGAGGAAAAATTGGGCTTGTCAGCCAAGAGCCTGTCCTTTTTGCATCTAGCATTAGGGATAACATTGCTTATGGAAAAGACGGAGCAACAAATGAAGAGATAAAAGCTGCATCTGAACTTGCAAATGCAGCTAAATTCATTGATAAATTGCCACAGGGACTGGACACAATGGTTGGGGACCATGGAACTCAGTTGTCCGGGGGACAAAAGCAGCGGATTGCCATTGCAAGAGCAATTCTCAAAAATCCAAAAATCCTACTTCTAGATGAAGCTACTAGTGCACTTGATGCAGAGTCTGAAAGGGTTGTGCAGGAGGCTCTTGACAGGATCATGGTAGACAGAACTACTGTTGTTGTGGCTCACCGCTTAAGCACGGTGAAAAATGCCGATATGATTGCCGTCATTCACAGAGGAAAGATGGTCGAGAAAGGAACGCACACAGAATTGCTCAAGGATCCTGAAGGAGCATACTCTCAGCTTATACGCCTACAGGAAGTAAATAAGTCAGAAGATGGTGTAGATCATGAAAACAAGCGTGAACTTTCCATAGAGTCCTTAAGGAATTCTAGTCTGAGAAGGTCATTGGGAAGATCCATAAGTCGAGGGTCATCGGGGGGAAATAGCAGCCGCCACTCATTTTCAGTTGCTTTTGGCTTGCCTACTGCAGTTAACAACAACATCACTGATCCCGAAACCGGACTTGAAATTCCTGAAACTGGAGAACAAGCACCAAAGGTGCCACTCCGCCGCCTTGCTGCCCTCAACAAGCCAGAGATCCCAGTCCTTGTGCTTGGATCTTTTGCTGCCATTGTGAATGGTGCTGTACTTCCTGTATTTGGCATCTTGCTTTCCAGTGCAATCAAATCTTTCTACGAGCCACCTGAAGAACTGAAAAAGGATACTAGGTTCTGGGCAATAATGTTCTTGATAATTGGTGTTGCAACTTTGGTGGCACTTCCTGCTCGAGGATACCTTTTTGCAGTTGCTGGATGTAAGCTAATCCAACGCATAAGGCTCATGTGCTTTGAGAAAGTAGTAAACATGGAGATAGGCTGGTTTGATGATCCTGAACATTCAAGTGGTGTGATTGGAGCAAGGCTCTCAGGAGATGCAGCATCTGTGCGTGCACTTGTTGGGGATGCTCTGGGCCAACTGGTTGAGAATCTCTCATCATTGGTAGCTGGTTTGTTAATTGCTTTCATTGCAAGCTGGCAGCTATCTCTTATTATTCTTGTTTTGATTCCCTTGATCGGAGTAAATGGGTATGTTCAAGTTAAATTCATGAAAGGCTTCAGTGCTGATGCAAAGATGATGTACGAGCAAGCAAGTCAAGTTGCTACTGATGCGGTGGGAAGTATAAGAACAGTGGCTTCTTTTTGTGCTGAAGAAAAGGTGATGGAACTGTACAGCAAGAAATGTGAAGCGCCTATGAAAACTGGGATTCATCAGGGTTTGATCAGCGGAACAGGATTTGGGGTATCGTTTTTCTTACTCTTCTGCGTCTATGCAACCAGCTTTTATGCGGGAGCTAGACTTGTGGACAATGGCAAAGCGACATTCTCAGATGTTTTCCGGGTTTTCTTTGGTTTAACTATGGCAGCTTTAGCAATTTCCCAATCAAGCTCTTTTGCTCCTGATTCTAGCAAAGCCAAGTCAGCTGCTGCTTCTATATTTGGAATGATTGACAGGAAGTCGTTGATAGATCCAAGTGACGATTCAGGAACCACTTTGGATAGCGTCAAAGGAGAAATTGAGCTTCGCCATGTTAGCTTTAAGTATCCATCTAGGCCGGACGTACAGATTTTCAGAGACCTTAGCTTGGCTATACATTCTGGAAAGACCGTAGCCCTTGTCGGTGAAAGTGGGAGTGGAAAATCTACGGTGATTTCGTTGTTACAGAGATTCTACGATCCTGATTCAGGTTCAATCACACTTGATGGGATAGAGATTCAAAAGTTCCAACTTAAATGGTTAAGGCAACAAATGGGTCTTGTGAGCCAAGAGCCAATATTGTTCAATGAAACTATTCGTGCCAATATTGCCTATGGAAAGGGAGGCAATGCAACTGAAGGAGAAATCATTGCTGCAGCCGAACTGGCCAATGCTCATAAGTTCATTAGCGGCTTACAACAAGGGTATGATACAGTAGTGGGAGAAAGGGGAATTCAATTATCAGGTGGGCAAAAGCAGAGAGTGGCAATAGCACGTGCCATAATTAAAAGTCCAAAGATTCTGTTATTAGATGAAGCAACAAGTGCATTGGATGCTGAATCAGAGAGGATAGTTCAAGATGCATTGGATAGAGTGATGGTGAATAGAACTACAGTGGTTGTGGCTCATCGTTTATCGACGATAAAAAATGCAGATGTTATAGCAGTGGTTAAGAACGGAGTCATAGTTGAGAAAGGAAGGCATGATACGTTGATTAACATCAAGGATGGATTTTATGCGTCTTTAGTCCAACTTCATGCGAGCGCTTCTACTTCATGA 3489 0.4357 MVTGERQAARIRGLYLKTILRQDVAFFDKETNTGEVVSRMSGDTVLIQDAMGEKVGKFLQLMSTFFAGYVVAFAKGWLLSLVMLSTLPLLVVSGAAMAFIIGRMASQGQTAYGKASNIVEQTIGAIRTVASFTGEKHAVSSYSRFLVDAYKSGVQEGFVAGAGIGTVMFVIFCGYALAIWYGAKLILDNKGGYNGGTVITVVFAVLTASMNLGQAAPCLTAFTAGQAAAYKMFKTIERKPEIDSYDDKGKVLEDIQGEIELREVYFSYPARPGELIFDGFSLKIPSGTTAALVGQSGSGKSTVVSLIERFYDPQSGEVLIDGINLKEFQLRWIRGKIGLVSQEPVLFASSIRDNIAYGKDGATNEEIKAASELANAAKFIDKLPQGLDTMVGDHGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERVVQEALDRIMVDRTTVVVAHRLSTVKNADMIAVIHRGKMVEKGTHTELLKDPEGAYSQLIRLQEVNKSEDGVDHENKRELSIESLRNSSLRRSLGRSISRGSSGGNSSRHSFSVAFGLPTAVNNNITDPETGLEIPETGEQAPKVPLRRLAALNKPEIPVLVLGSFAAIVNGAVLPVFGILLSSAIKSFYEPPEELKKDTRFWAIMFLIIGVATLVALPARGYLFAVAGCKLIQRIRLMCFEKVVNMEIGWFDDPEHSSGVIGARLSGDAASVRALVGDALGQLVENLSSLVAGLLIAFIASWQLSLIILVLIPLIGVNGYVQVKFMKGFSADAKMMYEQASQVATDAVGSIRTVASFCAEEKVMELYSKKCEAPMKTGIHQGLISGTGFGVSFFLLFCVYATSFYAGARLVDNGKATFSDVFRVFFGLTMAALAISQSSSFAPDSSKAKSAAASIFGMIDRKSLIDPSDDSGTTLDSVKGEIELRHVSFKYPSRPDVQIFRDLSLAIHSGKTVALVGESGSGKSTVISLLQRFYDPDSGSITLDGIEIQKFQLKWLRQQMGLVSQEPILFNETIRANIAYGKGGNATEGEIIAAAELANAHKFISGLQQGYDTVVGERGIQLSGGQKQRVAIARAIIKSPKILLLDEATSALDAESERIVQDALDRVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGRHDTLINIKDGFYASLVQLHASASTS 1162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0329 1162 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 248 497 IPR027417 -
Mibi02g0329 1162 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 224 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi02g0329 1162 FunFam ABC transporter B family member 1 575 883 - -
Mibi02g0329 1162 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 259 495 IPR003439 GO:0005524
Mibi02g0329 1162 CDD ABC_6TM_Pgp_ABCB1_D2_like 585 900 - -
Mibi02g0329 1162 Pfam ABC transporter 936 1085 IPR003439 GO:0005524
Mibi02g0329 1162 Gene3D - 257 513 IPR027417 -
Mibi02g0329 1162 SUPERFAMILY ABC transporter transmembrane region 3 243 IPR036640 GO:0005524|GO:0016020
Mibi02g0329 1162 SMART AAA_5 944 1137 IPR003593 -
Mibi02g0329 1162 SMART AAA_5 286 458 IPR003593 -
Mibi02g0329 1162 CDD ABC_6TM_Pgp_ABCB1_D1_like 1 232 - -
Mibi02g0329 1162 FunFam ABC transporter B family member 1 907 1157 - -
Mibi02g0329 1162 Pfam ABC transporter transmembrane region 596 867 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi02g0329 1162 Pfam ABC transporter transmembrane region 2 210 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi02g0329 1162 ProSitePatterns ABC transporters family signature. 1057 1071 IPR017871 GO:0005524|GO:0016887
Mibi02g0329 1162 Pfam ABC transporter 278 426 IPR003439 GO:0005524
Mibi02g0329 1162 ProSitePatterns ABC transporters family signature. 398 412 IPR017871 GO:0005524|GO:0016887
Mibi02g0329 1162 FunFam ABC transporter B family member 9 884 906 - -
Mibi02g0329 1162 Gene3D ABC transporter type 1, transmembrane domain 1 891 IPR036640 GO:0005524|GO:0016020
Mibi02g0329 1162 SUPERFAMILY ABC transporter transmembrane region 578 901 IPR036640 GO:0005524|GO:0016020
Mibi02g0329 1162 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 596 882 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi02g0329 1162 CDD ABC_MTABC3_MDL1_MDL2 259 497 - -
Mibi02g0329 1162 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 917 1154 IPR003439 GO:0005524
Mibi02g0329 1162 Gene3D - 907 1161 IPR027417 -
Mibi02g0329 1162 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 906 1155 IPR027417 -
Mibi02g0329 1162 FunFam ABC transporter B family member 1 249 498 - -
Mibi02g0329 1162 PANTHER ABC TRANSPORTER B FAMILY 1 500 - -
Mibi02g0329 1162 CDD ABC_MTABC3_MDL1_MDL2 917 1155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0329 Mibi-ChrMibi02 3263957 3268302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0329 597 1159 Calmodulin-binding Proteins AT2G36910 42.382 1.24e-135 442