Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi02g0325 | ATGTCATCTCTCCTAAACTCTCGTCTTGAGCCACCTCCCAAAGATTTTGTTCACCCCCAGAATAGATCTGTACTGTTTAACCAATTTTTTGTATGGCTGCGTCTGAGGCTGGAAAAAAAGTTCCTTTTTCTTAATTTATGTGACGCCAATTTTTATCATGAAGCAATAAAGGAGTTCTGTTTACTTATATTTATGGCTTTATTGAAGCCTTATTTTTTTTGGCTTTCAACAAAATTTGAATTACTTAAAGGCTCGCGAGAGAAAGAGAAAGAGAAAGAGAGCGACAGAAATTCGCCTTATCCCATTCGCGCCACCGTTCGCCGCAAGAGACCCATCATCTTCCCTCGTTTCCTTGGCTGCCATTTGCTTCCCCTCCGCCATATTTCCAACAGGTGGAACATTAGGATGGCCGGAGCTGAAGCTAAAAAGCCCTCTCCAAAACCATCTGGTGGGAAGAAGAAGGAGGTCAAGAAGGAGACCGGTTTAGGGCTTTCAAATCGGAAGGCGGACAACTTTGGGGAGTGGTACTCTGAGGTAGTTGTCAATGGGGAAATGATTGAGTACTATGACATTTCTGGATGTTACATTCTGAGGCCATGGGCAATGTCAATCTGGGAGGTGATGCAAGGCTTCTTTGATGCAGAGTTAAAGAAAATGAAAGTCAAGAACTGCTACTTCCCTTTATTTGTGTCTCCTGGCGTTTTGCAAAAGGAGAAGGATCATGTTGAGGGTTTTGCACCAGAGGTTGCTTGGGTGACAAAGTCTGGGGAAACTGATCTGGAGGTTCCTATTGCTATCCGTCCAACTAGTGAAACTGTCATGTATCCATACTACTCTAAGTGGATAAGGGGACATCGTGATTTGCCTTTGAAACTTAATCAGTGGTGCAATGTGGTTAGATGGGAGTTCAGTAATCCCACACCATTCATTAGGAGCCGTGAGTTTCTTTGGCAGGAAGGGCATACTGCTTTTGCGACAAAAGAGGAGGCAGATGCAGAGGTCCTCGAGATATTGGAATTGTATAGGCGTATATACGAAGAATATCTAGCAATTCCTGTCATAAAGGGTAAGAAAAGTGAGCTGGAGAAGTTTGCCGGTGGACTTTACACAACTAGTGTTGAGGCATTTATTCCAAACACCGGTCGTGGCATACAAGGTGCAACTTCTCATTGTCTTGGCCAAAATTTTGCTAAAATGTTTGAGATAAATTTTGAAAATGAGAAGGGAGAGAAAGCAATGGTCTGGCAGAACTCATGGGCCTATAGCACTCGAACTATTGGGGTTATGGTGATGGTTCATGGGGATGACAAAGGGCTTGTGCTGCCACCTAAAGTAGCATCAGTGCAAGTCATTGTGATTCCAGTGCCTTATAAAGATGCTGATACTCAAGGTATTCTTGATGCCTGCTCTGTTGCCGTGAATACTTTGTGTGAAGCAGGTATTCATGCTGAGTCAGACTTAAGAGATAACTATTCTCCTGGTTGGAAGTATTCACACTGGGAAATGAAAGGTGTTCCCCTAAGGATTGAAATCGGGCCAAAGGATTTGGCAAATAAGCAGGTGCGTGCTGTTCGACGTGATACTATGGGAAAAATGGACATACCCATGGATGATTTGGTCAATCAAGTCAAGGATTTGCTGCACAATATTCAACAAAACTTATTTGATTTGGCCAAAGAAAAACGAGATGCATGCATTCAGGTCGTACATACTTGGGATGAATTTGTGGAAGCATTGAGCCAACGGAAAATGATCTTGGCTCCTTGGTGTGATGAGGAGCCCGTGGAAGTAGATGTGAAAGCAAGGACAAAGGGTGAGATGGGAGCAGCTAAAACACTTTGTAGCCCCTTTGATCAACCGGAACTCCCCGAAGGTACCAAGTGCTTTGCATCAGGAAAGCCGGCTAAGAAGTGGACATATTGGGGCAGAAGTTACTAG | 1938 | 0.4381 | MSSLLNSRLEPPPKDFVHPQNRSVLFNQFFVWLRLRLEKKFLFLNLCDANFYHEAIKEFCLLIFMALLKPYFFWLSTKFELLKGSREKEKEKESDRNSPYPIRATVRRKRPIIFPRFLGCHLLPLRHISNRWNIRMAGAEAKKPSPKPSGGKKKEVKKETGLGLSNRKADNFGEWYSEVVVNGEMIEYYDISGCYILRPWAMSIWEVMQGFFDAELKKMKVKNCYFPLFVSPGVLQKEKDHVEGFAPEVAWVTKSGETDLEVPIAIRPTSETVMYPYYSKWIRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKEEADAEVLEILELYRRIYEEYLAIPVIKGKKSELEKFAGGLYTTSVEAFIPNTGRGIQGATSHCLGQNFAKMFEINFENEKGEKAMVWQNSWAYSTRTIGVMVMVHGDDKGLVLPPKVASVQVIVIPVPYKDADTQGILDACSVAVNTLCEAGIHAESDLRDNYSPGWKYSHWEMKGVPLRIEIGPKDLANKQVRAVRRDTMGKMDIPMDDLVNQVKDLLHNIQQNLFDLAKEKRDACIQVVHTWDEFVEALSQRKMILAPWCDEEPVEVDVKARTKGEMGAAKTLCSPFDQPELPEGTKCFASGKPAKKWTYWGRSY | 645 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi02g0325 | 645 | Pfam | Anticodon binding domain | 449 | 545 | IPR004154 | - | |
| Mibi02g0325 | 645 | SUPERFAMILY | C-terminal domain of ProRS | 567 | 645 | IPR017449 | GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 | |
| Mibi02g0325 | 645 | FunFam | bifunctional glutamate/proline--tRNA ligase | 443 | 563 | - | - | |
| Mibi02g0325 | 645 | SMART | ProRS_C_1_2 | 572 | 645 | IPR016061 | GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 | |
| Mibi02g0325 | 645 | Pfam | Prolyl-tRNA synthetase, C-terminal | 572 | 645 | IPR016061 | GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 | |
| Mibi02g0325 | 645 | Gene3D | Bira Bifunctional Protein; Domain 2 | 165 | 442 | IPR045864 | - | |
| Mibi02g0325 | 645 | CDD | ProRS_anticodon_zinc | 438 | 645 | - | - | |
| Mibi02g0325 | 645 | SUPERFAMILY | Class II aaRS ABD-related | 437 | 563 | - | - | |
| Mibi02g0325 | 645 | Hamap | Proline--tRNA ligase [proS]. | 165 | 645 | IPR004499 | GO:0004827|GO:0005524|GO:0005737|GO:0006433 | |
| Mibi02g0325 | 645 | FunFam | Proline--tRNA ligase, cytoplasmic | 566 | 645 | - | - | |
| Mibi02g0325 | 645 | TIGRFAM | proS_fam_I: proline--tRNA ligase | 167 | 645 | IPR004499 | GO:0004827|GO:0005524|GO:0005737|GO:0006433 | |
| Mibi02g0325 | 645 | ProSiteProfiles | Aminoacyl-transfer RNA synthetases class-II family profile. | 227 | 442 | IPR006195 | - | |
| Mibi02g0325 | 645 | SUPERFAMILY | Class II aaRS and biotin synthetases | 170 | 436 | IPR045864 | - | |
| Mibi02g0325 | 645 | PANTHER | PROLYL-TRNA SYNTHETASE | 140 | 645 | IPR004499 | GO:0004827|GO:0005524|GO:0005737|GO:0006433 | |
| Mibi02g0325 | 645 | Pfam | tRNA synthetase class II core domain (G, H, P, S and T) | 264 | 430 | IPR002314 | GO:0000166|GO:0004812|GO:0005524|GO:0006418 | |
| Mibi02g0325 | 645 | MobiDBLite | consensus disorder prediction | 139 | 160 | - | - | |
| Mibi02g0325 | 645 | CDD | ProRS_core_arch_euk | 171 | 432 | IPR033721 | - | |
| Mibi02g0325 | 645 | Gene3D | - | 443 | 563 | IPR036621 | - | |
| Mibi02g0325 | 645 | MobiDBLite | consensus disorder prediction | 146 | 160 | - | - | |
| Mibi02g0325 | 645 | PRINTS | Prolyl-tRNA synthetase signature | 294 | 302 | IPR002316 | GO:0004827|GO:0005524|GO:0005737|GO:0006433 | |
| Mibi02g0325 | 645 | PRINTS | Prolyl-tRNA synthetase signature | 304 | 315 | IPR002316 | GO:0004827|GO:0005524|GO:0005737|GO:0006433 | |
| Mibi02g0325 | 645 | PRINTS | Prolyl-tRNA synthetase signature | 223 | 241 | IPR002316 | GO:0004827|GO:0005524|GO:0005737|GO:0006433 | |
| Mibi02g0325 | 645 | PRINTS | Prolyl-tRNA synthetase signature | 264 | 275 | IPR002316 | GO:0004827|GO:0005524|GO:0005737|GO:0006433 | |
| Mibi02g0325 | 645 | FunFam | Bifunctional glutamate/proline--tRNA ligase | 164 | 442 | - | - | |
| Mibi02g0325 | 645 | Gene3D | - | 566 | 645 | IPR017449 | GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi02g0325 | Mibi-ChrMibi02 | 3207825 | 3215587 | Dispersed/Wgd |